perlecan (heparan sulfate proteoglycan 2)

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Synonym

per, Pcn, AI852380, HSPG, Plc, Perlecan, Hspg2, perlecan (heparan sulfate proteoglycan 2), PLC

normal 40 tissues
developmental tissues and primary cells（FANTOM5 CAGE）

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:24.30

cerebellum:36.80

brain stem:-

corpus callosum/glia:-

pineal gland:257.80

peripheral nerve:76.40

spine:-

retina:-

eye:53.20

artery/aorta:-

vein:-

lymphnode:10.80

peripheral blood:-

spleen:-

thymus:19.80

bone marrow:-

adipose:-

bone:37.60

skin:15.80

GeneChip

cerebrum:6.21

cerebellum:6.40

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:7.96

spine:6.91

retina:6.14

eye:6.56

artery/aorta:-

vein:9.10

lymphnode:7.70

peripheral blood:-

spleen:7.35

thymus:-

bone marrow:6.17

adipose:8.33

bone:6.85

skin:7.68

CAGE

cerebrum:1.81

cerebellum:-

brain stem:1.86

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:2.48

retina:-

eye:-

artery/aorta:5.02

vein:-

lymphnode:2.91

peripheral blood:-

spleen:2.76

thymus:2.61

bone marrow:-

adipose:-

bone:3.73

skin:4.11

RNA-seq

cerebrum:2.15

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:1187.40

prostate:30.90

ovary:-

testis:22.20

heart:130.20

muscle:142

esophagus:-

stomach:-

intestine:-

colon:88.10

liver/hepato:9.10

lung:70.30

bladder:66.20

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:37.50

breast:68.60

salivary:108

GeneChip

uterus:9.79

placenta:9.73

prostate:7.75

ovary:9.56

testis:7.01

heart:9.12

muscle:8.88

esophagus:-

stomach:8.09

intestine:7.62

colon:-

liver/hepato:6.97

lung:8.55

bladder:8.98

kidney:7.41

pituitary:7.19

thyroid/parathyroid:-

adrenal gland:8.36

pancreas:7.91

breast:8.81

salivary:8.17

CAGE

uterus:5.06

placenta:5.34

prostate:3.38

ovary:5.00

testis:0.99

heart:-

muscle:-

esophagus:-

stomach:2.73

intestine:3.35

colon:3.65

liver/hepato:2.96

lung:4.26

bladder:5.06

kidney:-

pituitary:3.33

thyroid/parathyroid:-

adrenal gland:4.95

pancreas:3.83

breast:4.25

salivary:-

RNA-seq

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:3.65

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:3.00

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

IDs

Refseq ID	NM_008305
Gene ID	15530
Unigene ID	Mm.273662
Probe set ID	1418670_s_at [Mouse430_2]
Ensembl ID	ENSMUSG00000028763

Orthologous Gene

Human[2]	NM_005529
Rat[2]	NM_005529

Chromosomal Region

4D3 [137,024,634 - 137,126,545]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR008985	Concanavalin A-like lectin/glucanase
IPR013320	Concanavalin A-like lectin/glucanase, subgroup
IPR001881	EGF-like calcium-binding
IPR000742	EGF-like, type 3
IPR013106	Immunoglobulin V-set
IPR003596	Immunoglobulin V-set, subgroup
IPR000034	Laminin B type IV
IPR018031	Laminin B, subgroup
IPR001791	Laminin G

GO:0001525	angiogenesis
GO:0007420	brain development
GO:0048738	cardiac muscle tissue development
GO:0060351	cartilage development involved in endochondral bone morphogenesis
GO:0002062	chondrocyte differentiation
GO:0048704	embryonic skeletal system morphogenesis
GO:0001958	endochondral ossification
GO:0030198	extracellular matrix organization
GO:0008104	protein localization

GO:0005605	basal lamina
GO:0005604	basement membrane
GO:0031012	extracellular matrix
GO:0005576	extracellular region
GO:0005615	extracellular space
GO:0070062	extracellular vesicular exosome
GO:0005578	proteinaceous extracellular matrix

GO:0046872	metal ion binding
GO:0005515	protein binding
GO:0008022	protein C-terminus binding

perlecan (heparan sulfate proteoglycan 2)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function