lymphotoxin B

Synonym

TNF-C, Lymphotoxin-beta, Tumor necrosis factor C, p33, Tnfc, Tumor necrosis factor ligand superfamily member 3, AI662801, Tnfsf3, LTbeta, lymphotoxin B, Ltb, LT-beta, lymphotoxin beta

normal 40 tissues
developmental tissues and primary cells（FANTOM5 CAGE）

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:33

cerebellum:18.40

brain stem:31.80

corpus callosum/glia:-

pineal gland:-

peripheral nerve:19.10

spine:94.60

retina:32.10

eye:30.40

artery/aorta:-

vein:-

lymphnode:21.60

peripheral blood:14.40

spleen:-

thymus:-

bone marrow:25.60

adipose:-

bone:-

skin:7.90

GeneChip

cerebrum:4.35

cerebellum:4.35

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:4.59

spine:4.61

retina:4.71

eye:4.75

artery/aorta:-

vein:4.35

lymphnode:11.98

peripheral blood:-

spleen:12.36

thymus:-

bone marrow:9.32

adipose:5.50

bone:8.94

skin:4.71

CAGE

cerebrum:0

cerebellum:-

brain stem:0

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:0

retina:-

eye:-

artery/aorta:0.83

vein:-

lymphnode:3.98

peripheral blood:-

spleen:3.58

thymus:3.17

bone marrow:-

adipose:-

bone:2.19

skin:0.60

RNA-seq

cerebrum:0.83

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:13.80

prostate:-

ovary:23

testis:7.40

heart:-

muscle:71

esophagus:-

stomach:-

intestine:-

colon:88.10

liver/hepato:-

lung:160.70

bladder:66.20

kidney:-

pituitary:-

thyroid/parathyroid:112.50

adrenal gland:-

pancreas:56.30

breast:140.40

salivary:-

GeneChip

uterus:6.45

placenta:4.74

prostate:5.04

ovary:5.16

testis:4.81

heart:4.92

muscle:6.33

esophagus:-

stomach:4.93

intestine:5.86

colon:-

liver/hepato:5

lung:6.66

bladder:4.70

kidney:4.78

pituitary:4.49

thyroid/parathyroid:-

adrenal gland:4.51

pancreas:5.47

breast:7.99

salivary:5.56

CAGE

uterus:0.55

placenta:0

prostate:0.37

ovary:0.13

testis:0

heart:-

muscle:-

esophagus:-

stomach:0

intestine:0.23

colon:1.63

liver/hepato:0.64

lung:2.25

bladder:0

kidney:-

pituitary:0

thyroid/parathyroid:-

adrenal gland:1.07

pancreas:0.84

breast:1.08

salivary:-

RNA-seq

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:1.72

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:1.18

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

IDs

Refseq ID	NM_008518
Gene ID	16994
Unigene ID	Mm.171514
Probe set ID	1419135_at [Mouse430_2]
Ensembl ID	ENSMUSG00000024399

Orthologous Gene

Human[2]	NM_002341, NM_009588
Rat[1]	NM_212507, NM_009588

Chromosomal Region

Gene Family (Interpro ID)

IPR006052	Tumor Necrosis Factor
IPR006053	Tumor necrosis factor alpha/beta/c
IPR002961	Tumour necrosis factor c/lymphotoxin-beta
IPR008983	Tumour necrosis factor-like

Gene Ontology (GO ID)

Biological Process

GO:0010467	gene expression
GO:0006955	immune response
GO:0048535	lymph node development
GO:0045084	positive regulation of interleukin-12 biosynthetic process
GO:0043588	skin development

Cellular Component

GO:0005615	extracellular space
GO:0016021	integral to membrane
GO:0016020	membrane
GO:0005886	plasma membrane

Molecular Function

GO:0005125	cytokine activity
GO:0005164	tumor necrosis factor receptor binding

lymphotoxin B

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function