protocadherin 10

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Synonym

6430521D13Rik, Pcdh10, protocadherin 10, mKIAA1400, 6430703F07Rik

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:6.96 cerebellum:4.59 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:4.87 spine:5.45 retina:4.15 eye:4.17 artery/aorta:- vein:4.39 lymphnode:3.88 peripheral blood:- spleen:3.88 thymus:- bone marrow:3.79 adipose:3.81 bone:4.01 skin:3.95
CAGE cerebrum:4.03 cerebellum:- brain stem:5.04 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:4.64 retina:- eye:- artery/aorta:0.25 vein:- lymphnode:0.23 peripheral blood:- spleen:0.93 thymus:0.27 bone marrow:- adipose:- bone:0 skin:0.69
RNA-seq cerebrum:8.57 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:3.86 placenta:3.83 prostate:3.81 ovary:3.80 testis:3.88 heart:4.04 muscle:3.87 esophagus:- stomach:3.92 intestine:3.94 colon:- liver/hepato:3.89 lung:3.83 bladder:4.05 kidney:3.84 pituitary:4.18 thyroid/parathyroid:- adrenal gland:4.14 pancreas:4.68 breast:3.93 salivary:4.06
CAGE uterus:0.17 placenta:0.29 prostate:0.51 ovary:0.45 testis:0.99 heart:- muscle:- esophagus:- stomach:0 intestine:0.23 colon:0.57     liver/hepato:0    lung:0 bladder:0.46 kidney:- pituitary:2.10 thyroid/parathyroid:- adrenal gland:2.29 pancreas:0 breast:0.46 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.28 esophagus:- stomach:- intestine:- colon:-     liver/hepato:3.20        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001098171
Gene ID 18526
Unigene ID -
Probe set ID 1425563_s_at  [Mouse430_2]
Ensembl ID ENSMUSG00000049100

Orthologous Gene

Human[2]  NM_020815, NM_032961
Rat[2]  NM_020815, NM_032961

Chromosomal Region

3B  [45,182,320  -  45,238,488]

Gene Family (Interpro ID)

IPR002126  Cadherin
IPR015919  Cadherin-like

Link to Pubmed  (Pubmed ID)

8889548
9920663
10349636
10835267
11042159
11076861
11217851
12466851
12477932
12693553
15882583
16141072
16141073
16602821
16774995
17721516
18644894
19262141
21267068
22982106
24351932
24496616

Gene Ontology  (GO ID)

Biological Process

GO:0007155  cell adhesion
GO:0007156  homophilic cell adhesion

Cellular Component

GO:0016021  integral to membrane
GO:0005887  integral to plasma membrane
GO:0016020  membrane
GO:0005886  plasma membrane