RAR-related orphan receptor gamma

Synonym

Nr1f3, Thymus orphan receptor, Rorc, Nuclear receptor ROR-gamma, RAR-related orphan receptor gamma, RORgamma, Thor, Nuclear receptor RZR-gamma, Rorg, thymus orphan receptor, TOR

normal 40 tissues
developmental tissues and primary cells（FANTOM5 CAGE）

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:5.20

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:47.30

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

GeneChip

cerebrum:4.46

cerebellum:6.01

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:4.70

spine:4.94

retina:4.66

eye:5.49

artery/aorta:-

vein:4.40

lymphnode:4.48

peripheral blood:-

spleen:4.74

thymus:-

bone marrow:4.01

adipose:6.77

bone:4.44

skin:6.07

CAGE

cerebrum:2.41

cerebellum:-

brain stem:1.99

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:2.33

retina:-

eye:-

artery/aorta:3.53

vein:-

lymphnode:2.05

peripheral blood:-

spleen:0.41

thymus:5.44

bone marrow:-

adipose:-

bone:2.45

skin:3.35

RNA-seq

cerebrum:3.63

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:-

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

GeneChip

uterus:5.55

placenta:4.58

prostate:6.91

ovary:5.44

testis:5.26

heart:7.35

muscle:8.21

esophagus:-

stomach:5.60

intestine:7.04

colon:-

liver/hepato:7.16

lung:5.21

bladder:5.27

kidney:6.64

pituitary:6.31

thyroid/parathyroid:-

adrenal gland:6.12

pancreas:5.95

breast:6.82

salivary:6.78

CAGE

uterus:2.57

placenta:0.47

prostate:3.64

ovary:2.49

testis:1.48

heart:-

muscle:-

esophagus:-

stomach:2.52

intestine:4.30

colon:3.71

liver/hepato:5.35

lung:2.57

bladder:2.56

kidney:-

pituitary:3.72

thyroid/parathyroid:-

adrenal gland:3.26

pancreas:2.90

breast:3.78

salivary:-

RNA-seq

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:11.58

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:6.21

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

IDs

Refseq ID	NM_011281
Gene ID	19885
Unigene ID	Mm.437200
Probe set ID	1425792_a_at [Mouse430_2]
Ensembl ID	ENSMUSG00000028150

Orthologous Gene

Human[4]	NM_001001523, NM_005060
Rat[4]	NM_001001523, NM_005060

Chromosomal Region

Gene Family (Interpro ID)

IPR003079	Nuclear receptor ROR
IPR001723	Steroid hormone receptor
IPR013088	Zinc finger, NHR/GATA-type
IPR001628	Zinc finger, nuclear hormone receptor-type

Gene Ontology (GO ID)

Biological Process

GO:0046632	alpha-beta T cell differentiation
GO:0030154	cell differentiation
GO:0030522	intracellular receptor-mediated signaling pathway
GO:0048535	lymph node development
GO:0048537	mucosal-associated lymphoid tissue development
GO:0007275	multicellular organismal development
GO:0006468	protein amino acid phosphorylation
GO:0006355	regulation of transcription, DNA-dependent
GO:0043401	steroid hormone mediated signaling pathway
GO:0033077	T cell differentiation in the thymus
GO:0006351	transcription, DNA-dependent

Cellular Component

GO:0005634

nucleus

Molecular Function

GO:0003677	DNA binding
GO:0004879	ligand-dependent nuclear receptor activity
GO:0046872	metal ion binding
GO:0005515	protein binding
GO:0043565	sequence-specific DNA binding
GO:0003707	steroid hormone receptor activity
GO:0003700	transcription factor activity
GO:0008270	zinc ion binding

RAR-related orphan receptor gamma

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function