SUB1 homolog (S. cerevisiae)

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Synonym

Single-stranded DNA-binding protein p9, SUB1 homolog, SUB1 homolog (S. cerevisia, Positive cofactor 4, Pc4, P9, AI842364, Sub1, P15, Rpo2tc1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:201.40 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:152.90 spine:94.60 retina:192.90 eye:152 artery/aorta:- vein:- lymphnode:86.40 peripheral blood:86.30 spleen:65.80 thymus:138.30 bone marrow:64.10 adipose:- bone:100.20 skin:79.20
GeneChip cerebrum:10.47 cerebellum:9.01 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:8.91 spine:8.43 retina:8.86 eye:7.74 artery/aorta:- vein:7.02 lymphnode:6.69 peripheral blood:- spleen:6.24 thymus:- bone marrow:5.61 adipose:7.32 bone:6.29 skin:6.68
CAGE cerebrum:5.16 cerebellum:- brain stem:4.98 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:4.73 retina:- eye:- artery/aorta:4.68 vein:- lymphnode:5.16 peripheral blood:- spleen:5.13 thymus:5.42 bone marrow:- adipose:- bone:5.28 skin:4.58
RNA-seq cerebrum:22.39 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:349 placenta:69 prostate:1173.60 ovary:195.30 testis:280.80 heart:18.60 muscle:71 esophagus:- stomach:163.60 intestine:258.80 colon:35.20     liver/hepato:99.60        lung:30.10    bladder:- kidney:32.20 pituitary:51.70 thyroid/parathyroid:449.90 adrenal gland:- pancreas:178.30 breast:65.30 salivary:-
GeneChip uterus:7.10 placenta:6.59 prostate:7.29 ovary:7.34 testis:6.03 heart:6.66 muscle:8.30 esophagus:- stomach:6.55 intestine:6.46 colon:- liver/hepato:7.42 lung:7.42 bladder:7.80 kidney:6.84 pituitary:7.40 thyroid/parathyroid:- adrenal gland:7.45 pancreas:6.98 breast:7.25 salivary:5.78
CAGE uterus:4.75 placenta:5.29 prostate:4.82 ovary:4.66 testis:5.93 heart:- muscle:- esophagus:- stomach:5.05 intestine:4.69 colon:4.79     liver/hepato:4.88    lung:5.15 bladder:4.94 kidney:- pituitary:5.13 thyroid/parathyroid:- adrenal gland:4.57 pancreas:4.81 breast:5.08 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:29.93 esophagus:- stomach:- intestine:- colon:-     liver/hepato:27.26        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_011294
Gene ID 20024
Unigene ID Mm.41746
Probe set ID 1422692_at  [Mouse430_2]
Ensembl ID ENSMUSG00000022205

Orthologous Gene

Human[6]  NM_006713
Rat [0]  

Chromosomal Region

-

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

3372536
7798170
8889548
10349636
10922068
11042159
11076861
11125038
11217851
12466851
12477932
12520002
12904583
14610273
14681479
15489334
16003322
16033648
16141072
16141073
16602821
16982701
18287559
18836447
18973680
19047459
20059953
21267068
21677750
22354994
23390484
23665500

Gene Ontology  (GO ID)

Biological Process

GO:0006357  regulation of transcription from RNA polymerase II promoter
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005730  nucleolus
GO:0005634  nucleus
GO:0005667  transcription factor complex

Molecular Function

GO:0003677  DNA binding
GO:0003697  single-stranded DNA binding
GO:0003713  transcription coactivator activity