stimulated by retinoic acid gene 6

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Synonym

stimulated by retinoic acid gene 6, AI891933, Stra6

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:22.60 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:47.30 retina:64.30 eye:159.60 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:13.20 thymus:- bone marrow:- adipose:- bone:25 skin:15.80
GeneChip cerebrum:5.64 cerebellum:5.73 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:6.17 spine:5.49 retina:7.57 eye:5.75 artery/aorta:- vein:5.10 lymphnode:6.52 peripheral blood:- spleen:5.73 thymus:- bone marrow:5.23 adipose:5.70 bone:5.21 skin:5.42
CAGE cerebrum:1.37 cerebellum:- brain stem:1.35 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:0.66 retina:- eye:- artery/aorta:0.25 vein:- lymphnode:0 peripheral blood:- spleen:0 thymus:0.67 bone marrow:- adipose:- bone:0 skin:2.94
RNA-seq cerebrum:2.01 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:27.60 prostate:- ovary:23 testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:9.10        lung:10    bladder:- kidney:16.10 pituitary:25.80 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:22.90 salivary:-
GeneChip uterus:7.93 placenta:8.61 prostate:7.07 ovary:7.15 testis:6.06 heart:5.74 muscle:5.60 esophagus:- stomach:5.49 intestine:5.78 colon:- liver/hepato:5.48 lung:5.39 bladder:5.16 kidney:5.73 pituitary:5.59 thyroid/parathyroid:- adrenal gland:5.52 pancreas:5.82 breast:5.59 salivary:5.71
CAGE uterus:2.53 placenta:4.15 prostate:1.60 ovary:1.88 testis:1.60 heart:- muscle:- esophagus:- stomach:0.67 intestine:0 colon:0     liver/hepato:0    lung:0 bladder:0.18 kidney:- pituitary:0.52 thyroid/parathyroid:- adrenal gland:0.47 pancreas:0 breast:1.18 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:0.84 esophagus:- stomach:- intestine:- colon:-     liver/hepato:0        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001162479
Gene ID 20897
Unigene ID Mm.10801
Probe set ID 1422723_at  [Mouse430_2]
Ensembl ID ENSMUSG00000032327

Orthologous Gene

Human[5]  NM_001142617, NM_001142618, NM_001142619, NM_001142620, NM_001199040, NM_001199041, NM_001199042, NM_022369
Rat[1]  NM_001029924, NM_001142618, NM_001142619, NM_001142620, NM_001199040, NM_001199041, NM_001199042, NM_022369

Chromosomal Region

9B  [57,911,595  -  58,001,803]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7649373
8792610
9203140
9356169
10349636
10727869
11042159
11076861
11125038
11217851
12466851
12477932
14610273
15944189
16141072
16141073
16602821
16707424
18093970
18799693
20562862
21267068
21368206
21677750
22467576
22739370
22826435
23105095
23449393
23839944
23959802
24005908
24421389

Gene Ontology  (GO ID)

Biological Process

GO:0030325  adrenal gland development
GO:0048844  artery morphogenesis
GO:0001568  blood vessel development
GO:0050890  cognition
GO:0048589  developmental growth
GO:0060539  diaphragm development
GO:0048546  digestive tract morphogenesis
GO:0043583  ear development
GO:0060900  embryonic camera-type eye formation
GO:0048566  embryonic gut development
GO:0060325  face morphogenesis
GO:0007631  feeding behavior
GO:0030540  female genitalia development
GO:0060322  head development
GO:0060323  head morphogenesis
GO:0007507  heart development
GO:0001822  kidney development
GO:0007612  learning
GO:0048286  lung alveolus development
GO:0030324  lung development
GO:0060426  lung vasculature development
GO:0050905  neuromuscular process
GO:0043585  nose morphogenesis
GO:0048520  positive regulation of behavior
GO:0003184  pulmonary valve morphogenesis
GO:0048745  smooth muscle tissue development
GO:0006810  transport
GO:0003281  ventricular septum development
GO:0042297  vocal learning

Cellular Component

GO:0016021  integral to membrane
GO:0016020  membrane
GO:0005886  plasma membrane
GO:0043234  protein complex

Molecular Function

GO:0004872  receptor activity
GO:0051183  vitamin transporter activity