collagen, type XXVIII, alpha 1

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Synonym

Gm466, collagen, type XXVIII, alpha 1, Col28, Col28a1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE nodata
RNA-seq cerebrum:0.93 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:7.40 heart:- muscle:35.50 esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.32 esophagus:- stomach:- intestine:- colon:-     liver/hepato:0        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001037865
Gene ID 213945
Unigene ID Mm.297404
Probe set ID -
Ensembl ID ENSMUSG00000068794

Orthologous Gene

Human[1]  NM_001037763
Rat[1]  NM_001037763

Chromosomal Region

6A1  [7,947,808  -  8,142,617]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
16330543
18799693
20830809

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0007155  cell adhesion
GO:0010466  negative regulation of peptidase activity

Cellular Component

GO:0005604  basement membrane
GO:0005581  collagen
GO:0005576  extracellular region
GO:0005578  proteinaceous extracellular matrix

Molecular Function

GO:0003674  molecular_function
GO:0030414  peptidase inhibitor activity
GO:0004867  serine-type endopeptidase inhibitor activity