lin-54 homolog (C. elegans)

 jump to detail

Synonym

AI461788, KIAA2037, expressed sequence AI461788, 4832414L08, mKIAA2037

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:20.80 cerebellum:18.40 brain stem:31.80 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:64.30 eye:30.40 artery/aorta:- vein:- lymphnode:- peripheral blood:43.10 spleen:105.30 thymus:39.50 bone marrow:- adipose:- bone:50.10 skin:7.90
GeneChip nodata
CAGE cerebrum:1.69 cerebellum:- brain stem:1.41 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:1.63 retina:- eye:- artery/aorta:1.87 vein:- lymphnode:2.79 peripheral blood:- spleen:2.73 thymus:2.11 bone marrow:- adipose:- bone:2.93 skin:2.52
RNA-seq cerebrum:1.31 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:30.90 ovary:114.90 testis:36.90 heart:18.60 muscle:35.50 esophagus:- stomach:- intestine:- colon:-     liver/hepato:9.10        lung:30.10    bladder:- kidney:- pituitary:12.90 thyroid/parathyroid:- adrenal gland:- pancreas:9.40 breast:52.20 salivary:-
GeneChip nodata
CAGE uterus:1.27 placenta:2.15 prostate:1.56 ovary:1.81 testis:1.89 heart:- muscle:- esophagus:- stomach:1.91 intestine:2.25 colon:2.32     liver/hepato:1.75    lung:2.17 bladder:1.80 kidney:- pituitary:1.81 thyroid/parathyroid:- adrenal gland:1.80 pancreas:2.19 breast:2.65 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.55 esophagus:- stomach:- intestine:- colon:-     liver/hepato:1.73        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001115010
Gene ID 231506
Unigene ID Mm.212568
Probe set ID -
Ensembl ID ENSMUSG00000035310

Orthologous Gene

Human[3]  NM_001115007, NM_001115008, NM_194282
Rat[1]  NM_001100564, NM_001115008, NM_194282

Chromosomal Region

5E4  [100,870,937  -  100,929,658]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10349636
10922068
11042159
11076861
11125038
11217851
12466851
12477932
12904583
14610273
16141072
16141073
18799693
20360068
21565611
21677750
22770845

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0007049  cell cycle
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005575  cellular_component
GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0003674  molecular_function