suppressor of var1, 3-like 1 (S. cerevisiae)

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Synonym

suppressor of var1, 3-like 1 (S. cerevisiae), Supv3l1, 6330443E10Rik

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:12.20 cerebellum:18.40 brain stem:158.90 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:22.80 artery/aorta:- vein:- lymphnode:- peripheral blood:14.40 spleen:52.70 thymus:59.30 bone marrow:- adipose:- bone:25 skin:63.30
GeneChip cerebrum:7.33 cerebellum:7.45 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:7.45 spine:7.45 retina:7.01 eye:6.76 artery/aorta:- vein:7.03 lymphnode:7.89 peripheral blood:- spleen:7.75 thymus:- bone marrow:7.81 adipose:8.49 bone:7.47 skin:6.90
CAGE cerebrum:3.08 cerebellum:- brain stem:2.93 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:2.99 retina:- eye:- artery/aorta:3.32 vein:- lymphnode:2.38 peripheral blood:- spleen:2.84 thymus:2.74 bone marrow:- adipose:- bone:2.53 skin:2.62
RNA-seq cerebrum:3.47 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:27.60 prostate:30.90 ovary:114.90 testis:7.40 heart:18.60 muscle:35.50 esophagus:- stomach:- intestine:- colon:-     liver/hepato:9.10        lung:30.10    bladder:- kidney:72.50 pituitary:51.70 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:16.30 salivary:-
GeneChip uterus:7.73 placenta:7.52 prostate:7.63 ovary:8.10 testis:8.13 heart:9.05 muscle:8.28 esophagus:- stomach:7.99 intestine:8 colon:- liver/hepato:8.33 lung:7.03 bladder:7.40 kidney:8.52 pituitary:7.60 thyroid/parathyroid:- adrenal gland:8.31 pancreas:6.96 breast:7.83 salivary:7.48
CAGE uterus:2.89 placenta:2.89 prostate:2.62 ovary:2.78 testis:3.61 heart:- muscle:- esophagus:- stomach:3.05 intestine:3.18 colon:3.07     liver/hepato:3.22    lung:2.52 bladder:2.86 kidney:- pituitary:2.98 thyroid/parathyroid:- adrenal gland:3.08 pancreas:2.56 breast:2.95 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:6.80 esophagus:- stomach:- intestine:- colon:-     liver/hepato:3.70        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_181423
Gene ID 338359
Unigene ID Mm.235898
Probe set ID 1460557_at  [Mouse430_2]
Ensembl ID ENSMUSG00000020079

Orthologous Gene

Human[1]  NM_003171
Rat [0]  

Chromosomal Region

-

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889548
10349636
10922068
11042159
11076861
11217851
12466851
12477932
14610273
14651853
15782199
16141072
16141073
17961633
18614015
19145458
19937380
21677750
22562243

Gene Ontology  (GO ID)

Biological Process

GO:0070827  chromatin maintenance
GO:0032508  DNA duplex unwinding
GO:0006310  DNA recombination
GO:0000958  mitochondrial mRNA catabolic process
GO:0000965  mitochondrial RNA 3'-end processing
GO:0070584  mitochondrion morphogenesis
GO:0043066  negative regulation of apoptosis
GO:0030307  positive regulation of cell growth
GO:0000962  positive regulation of mitochondrial RNA catabolic process
GO:0006401  RNA catabolic process

Cellular Component

GO:0045025  mitochondrial degradosome
GO:0005759  mitochondrial matrix
GO:0042645  mitochondrial nucleoid
GO:0005739  mitochondrion
GO:0005634  nucleus

Molecular Function

GO:0034458  3'-5' RNA helicase activity
GO:0005524  ATP binding
GO:0004004  ATP-dependent RNA helicase activity
GO:0003677  DNA binding
GO:0003678  DNA helicase activity
GO:0003725  double-stranded RNA binding
GO:0004386  helicase activity
GO:0016787  hydrolase activity
GO:0016817  hydrolase activity, acting on acid anhydrides
GO:0003676  nucleic acid binding
GO:0000166  nucleotide binding
GO:0042803  protein homodimerization activity