astrotactin 2

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Synonym

bM452J22.1, astrotactin 2, Astn2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:3.50 cerebellum:55.30 brain stem:31.80 corpus callosum/glia:- pineal gland:- peripheral nerve:38.20 spine:- retina:- eye:7.60 artery/aorta:253.20 vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:7.90
GeneChip cerebrum:4.12 cerebellum:4.52 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:4.17 spine:4.11 retina:4 eye:4.37 artery/aorta:- vein:3.80 lymphnode:4.13 peripheral blood:- spleen:4.15 thymus:- bone marrow:3.70 adipose:3.99 bone:4.02 skin:4.07
CAGE cerebrum:4.54 cerebellum:- brain stem:3.71 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.42 retina:- eye:- artery/aorta:1.75 vein:- lymphnode:0.71 peripheral blood:- spleen:1.66 thymus:0.95 bone marrow:- adipose:- bone:1.02 skin:0.29
RNA-seq cerebrum:9.14 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4 placenta:4 prostate:4.03 ovary:3.91 testis:4 heart:4.21 muscle:3.94 esophagus:- stomach:4.06 intestine:4.05 colon:- liver/hepato:4.04 lung:4.04 bladder:3.99 kidney:4.07 pituitary:3.96 thyroid/parathyroid:- adrenal gland:3.99 pancreas:4.21 breast:4.01 salivary:4.86
CAGE uterus:2.39 placenta:0 prostate:1.23 ovary:1.96 testis:0 heart:- muscle:- esophagus:- stomach:1.07 intestine:0.95 colon:0.82     liver/hepato:1.02    lung:3.03 bladder:2.12 kidney:- pituitary:1.40 thyroid/parathyroid:- adrenal gland:1.82 pancreas:0.84 breast:0.32 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:0.62 esophagus:- stomach:- intestine:- colon:-     liver/hepato:1.68        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_019514
Gene ID 56079
Unigene ID Mm.445312
Probe set ID 1450309_at  [Mouse430_2]
Ensembl ID ENSMUSG00000028373

Orthologous Gene

Human[6]  NM_001184734, NM_001184735, NM_014010, NM_198186, NM_198187, NM_198188
Rat[6]  NM_001184734, NM_001184735, NM_014010, NM_198186, NM_198187, NM_198188

Chromosomal Region

-

Gene Family (Interpro ID)

IPR020864  Membrane attack complex component/perforin (MACPF) domain

Link to Pubmed  (Pubmed ID)

9989976
10349636
11042159
11076861
11217851
12466851
15368895
16141072
16141073
16602821
20005822
20573900
21267068
21491433
21677750

Gene Ontology  (GO ID)

Cellular Component

GO:0060187  cell pole
GO:0005768  endosome
GO:0016021  integral to membrane
GO:0016020  membrane

Molecular Function

GO:0005515  protein binding