splicing factor 3b, subunit 5

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Synonym

SF3b5, 1110005L13Rik, Sf3b10, AU043053, Sf3b5, Splicing factor 3B subunit 5, splicing factor 3b, subunit 5, Pre-mRNA-splicing factor SF3b 10 kDa subunit

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:18.40 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:19.80 bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:9.49 cerebellum:9.07 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:9.46 spine:9 retina:6.85 eye:7.33 artery/aorta:- vein:10.51 lymphnode:10.36 peripheral blood:- spleen:9.95 thymus:- bone marrow:10.49 adipose:9.89 bone:10.52 skin:9.63
CAGE cerebrum:3.79 cerebellum:- brain stem:3.73 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.72 retina:- eye:- artery/aorta:3.62 vein:- lymphnode:3.63 peripheral blood:- spleen:4.27 thymus:4.13 bone marrow:- adipose:- bone:4.08 skin:3.82
RNA-seq cerebrum:17.66 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:10.10 placenta:9.72 prostate:9.81 ovary:10.02 testis:9.57 heart:9.05 muscle:9.74 esophagus:- stomach:9.95 intestine:9.83 colon:- liver/hepato:9.22 lung:9.82 bladder:9.66 kidney:9.43 pituitary:9.26 thyroid/parathyroid:- adrenal gland:9.85 pancreas:9.08 breast:9.83 salivary:9.72
CAGE uterus:3.92 placenta:4.12 prostate:4.12 ovary:3.91 testis:4.87 heart:- muscle:- esophagus:- stomach:4.20 intestine:3.98 colon:3.96     liver/hepato:3.97    lung:3.98 bladder:3.87 kidney:- pituitary:4.16 thyroid/parathyroid:- adrenal gland:3.86 pancreas:3.86 breast:3.98 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:9.24 esophagus:- stomach:- intestine:- colon:-     liver/hepato:7.24        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_175102
Gene ID 66125
Unigene ID Mm.402225
Probe set ID 1451185_at  [Mouse430_2]
Ensembl ID ENSMUSG00000078348

Orthologous Gene

Human[1]  NM_031287
Rat[1]  NM_001126092

Chromosomal Region

-

Gene Family (Interpro ID)

IPR009846  Splicing factor 3B subunit 5/RDS3 complex subunit 10
IPR017089  Splicing factor 3B, subunit 5

Link to Pubmed  (Pubmed ID)

8889548
10349636
10725249
10922068
11042159
11076861
11217851
12466851
12477932
15489334
16141072
16141073
18973680
21267068

Gene Ontology  (GO ID)

Biological Process

GO:0006397  mRNA processing
GO:0008380  RNA splicing

Cellular Component

GO:0005634  nucleus
GO:0005681  spliceosomal complex
GO:0005689  U12-type spliceosomal complex

Molecular Function

GO:0003674  molecular_function