calcium binding and coiled coil domain 1

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Synonym

mKIAA1536, Cocoa, KIAA1536, calcium binding and coiled coil domain 1, CoCoA, 1810009B06Rik, Calcoco1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:33 cerebellum:36.80 brain stem:31.80 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:32.10 eye:152 artery/aorta:- vein:- lymphnode:75.60 peripheral blood:86.30 spleen:- thymus:19.80 bone marrow:- adipose:425.40 bone:25 skin:31.70
GeneChip nodata
CAGE cerebrum:3.08 cerebellum:- brain stem:3.05 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.13 retina:- eye:- artery/aorta:3.32 vein:- lymphnode:2.08 peripheral blood:- spleen:2.33 thymus:2.44 bone marrow:- adipose:- bone:2.66 skin:3.46
RNA-seq cerebrum:11.94 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:41.40 prostate:- ovary:34.50 testis:7.40 heart:55.80 muscle:142 esophagus:- stomach:- intestine:- colon:35.20     liver/hepato:18.10        lung:70.30    bladder:198.50 kidney:64.50 pituitary:90.40 thyroid/parathyroid:112.50 adrenal gland:- pancreas:93.80 breast:35.90 salivary:324
GeneChip nodata
CAGE uterus:3.15 placenta:2.67 prostate:2.73 ovary:3.20 testis:3.00 heart:- muscle:- esophagus:- stomach:2.85 intestine:1.49 colon:2.32     liver/hepato:2.29    lung:3.66 bladder:3.58 kidney:- pituitary:3.68 thyroid/parathyroid:- adrenal gland:3.57 pancreas:2.90 breast:2.76 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:11.24 esophagus:- stomach:- intestine:- colon:-     liver/hepato:4.00        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_026192
Gene ID 67488
Unigene ID Mm.71682
Probe set ID -
Ensembl ID ENSMUSG00000023055

Orthologous Gene

Human[2]  NM_001143682, NM_020898
Rat[1]  NM_139190, NM_020898

Chromosomal Region

15F3  [102,537,210  -  102,552,609]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7808216
8889548
10349636
11042159
11076861
11217851
12466851
12477932
14610273
14690606
15383530
15782199
16141072
16141073
16344550
18973680
20562862
21267068
21677750
24245781

Gene Ontology  (GO ID)

Biological Process

GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0007165  signal transduction
GO:0030518  steroid hormone receptor signaling pathway
GO:0006351  transcription, DNA-dependent
GO:0016055  Wnt receptor signaling pathway

Cellular Component

GO:0005737  cytoplasm
GO:0043231  intracellular membrane-bounded organelle
GO:0000790  nuclear chromatin
GO:0005634  nucleus

Molecular Function

GO:0070016  armadillo repeat domain binding
GO:0008013  beta-catenin binding
GO:0003682  chromatin binding
GO:0044212  DNA regulatory region binding
GO:0030374  ligand-dependent nuclear receptor transcription coactivator activity
GO:0005515  protein binding
GO:0008022  protein C-terminus binding
GO:0043565  sequence-specific DNA binding
GO:0003713  transcription coactivator activity
GO:0003712  transcription cofactor activity