nuclear cap binding protein subunit 2

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Synonym

C79367, NCBP 20 kDa subunit, Nuclear cap-binding protein subunit 2, Ncbp2, CBP20, AI843301, AA536802, nuclear cap binding protein subunit 2, 20 kDa nuclear cap-binding protein, 5930413E18Rik

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:93.80 cerebellum:36.80 brain stem:190.70 corpus callosum/glia:- pineal gland:515.60 peripheral nerve:76.40 spine:- retina:64.30 eye:60.80 artery/aorta:- vein:- lymphnode:10.80 peripheral blood:43.10 spleen:- thymus:138.30 bone marrow:- adipose:- bone:150.30 skin:55.40
GeneChip cerebrum:9.26 cerebellum:9.01 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:9.23 spine:8.94 retina:10.74 eye:10.06 artery/aorta:- vein:9.71 lymphnode:9.10 peripheral blood:- spleen:8.99 thymus:- bone marrow:9.10 adipose:9.22 bone:9.06 skin:9.20
CAGE cerebrum:3.73 cerebellum:- brain stem:3.61 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.48 retina:- eye:- artery/aorta:3.62 vein:- lymphnode:3.69 peripheral blood:- spleen:3.43 thymus:3.69 bone marrow:- adipose:- bone:3.28 skin:3.44
RNA-seq cerebrum:8.47 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:349 placenta:151.90 prostate:30.90 ovary:103.40 testis:184.70 heart:93 muscle:71 esophagus:- stomach:229.10 intestine:184.90 colon:88.10     liver/hepato:36.20        lung:50.20    bladder:- kidney:56.40 pituitary:335.80 thyroid/parathyroid:- adrenal gland:- pancreas:75.10 breast:49 salivary:-
GeneChip uterus:9.72 placenta:9.11 prostate:9.58 ovary:9.65 testis:8.16 heart:9 muscle:8.25 esophagus:- stomach:8.89 intestine:8.71 colon:- liver/hepato:8.63 lung:9.30 bladder:9.71 kidney:9 pituitary:10.22 thyroid/parathyroid:- adrenal gland:9.89 pancreas:8.22 breast:9.18 salivary:9.32
CAGE uterus:3.76 placenta:3.73 prostate:3.81 ovary:3.75 testis:4.62 heart:- muscle:- esophagus:- stomach:3.59 intestine:3.14 colon:3.05     liver/hepato:3.36    lung:3.40 bladder:3.81 kidney:- pituitary:4.29 thyroid/parathyroid:- adrenal gland:3.70 pancreas:3.16 breast:3.74 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:2.45 esophagus:- stomach:- intestine:- colon:-     liver/hepato:4.76        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_026554
Gene ID 68092
Unigene ID Mm.290027
Probe set ID 1423046_s_at  [Mouse430_2]
Ensembl ID ENSMUSG00000022774

Orthologous Gene

Human[4]  NM_001042540, NM_007362
Rat[1]  NM_001109525, NM_007362

Chromosomal Region

-

Gene Family (Interpro ID)

IPR000504  RNA recognition motif, RNP-1

Link to Pubmed  (Pubmed ID)

8889548
10349636
10725249
10786834
10922068
11042159
11076861
11217851
12466851
12477932
12520002
14610273
14729942
15782199
16141072
16141073
17967808
18287559
18799693
21677750

Gene Ontology  (GO ID)

Biological Process

GO:0031047  gene silencing by RNA
GO:0006370  mRNA capping
GO:0006397  mRNA processing
GO:0051028  mRNA transport
GO:0045292  nuclear mRNA cis splicing, via spliceosome
GO:0000184  nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0006417  regulation of translation
GO:0006446  regulation of translational initiation
GO:0008380  RNA splicing
GO:0006810  transport

Cellular Component

GO:0005737  cytoplasm
GO:0005845  mRNA cap binding complex
GO:0005846  nuclear cap binding complex
GO:0005654  nucleoplasm
GO:0005634  nucleus

Molecular Function

GO:0003676  nucleic acid binding
GO:0000166  nucleotide binding
GO:0000340  RNA 7-methylguanosine cap binding
GO:0003723  RNA binding
GO:0000339  RNA cap binding