TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)

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Synonym

2610027O18Rik, mKIAA1393, KIAA1393, Trmt5

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:19.10 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:15.20 artery/aorta:84.40 vein:- lymphnode:10.80 peripheral blood:57.50 spleen:- thymus:59.30 bone marrow:- adipose:- bone:12.50 skin:7.90
GeneChip cerebrum:6.36 cerebellum:6.20 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:6.98 spine:6.18 retina:6.24 eye:6.07 artery/aorta:- vein:6.34 lymphnode:6.70 peripheral blood:- spleen:6.52 thymus:- bone marrow:6.67 adipose:6.54 bone:6.37 skin:6.41
CAGE cerebrum:2.58 cerebellum:- brain stem:2.49 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:2.70 retina:- eye:- artery/aorta:2.78 vein:- lymphnode:2.92 peripheral blood:- spleen:2.41 thymus:2.57 bone marrow:- adipose:- bone:1.97 skin:2.33
RNA-seq cerebrum:1.87 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:23 testis:14.80 heart:- muscle:142 esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:20.10    bladder:- kidney:- pituitary:25.80 thyroid/parathyroid:- adrenal gland:- pancreas:28.10 breast:19.60 salivary:-
GeneChip uterus:6.43 placenta:6.88 prostate:6.77 ovary:6.58 testis:7.46 heart:8.13 muscle:6.63 esophagus:- stomach:6.06 intestine:6.32 colon:- liver/hepato:6.47 lung:6.32 bladder:6.47 kidney:6.01 pituitary:6.38 thyroid/parathyroid:- adrenal gland:6.35 pancreas:5.56 breast:6.66 salivary:6.20
CAGE uterus:2.63 placenta:2.58 prostate:2.62 ovary:2.68 testis:3.90 heart:- muscle:- esophagus:- stomach:2.66 intestine:2.60 colon:2.27     liver/hepato:2.68    lung:2.31 bladder:2.33 kidney:- pituitary:2.83 thyroid/parathyroid:- adrenal gland:2.77 pancreas:2.56 breast:2.65 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.48 esophagus:- stomach:- intestine:- colon:-     liver/hepato:1.54        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_029580
Gene ID 76357
Unigene ID Mm.311344
Probe set ID 1452086_at  [Mouse430_2]
Ensembl ID ENSMUSG00000034442

Orthologous Gene

Human[1]  NM_020810
Rat[1]  NM_001108713

Chromosomal Region

-

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10349636
10922068
11042159
11076861
11125038
11217851
12466851
12477932
14610273
15489334
16141072
16141073

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0032259  methylation
GO:0030488  tRNA methylation
GO:0008033  tRNA processing

Cellular Component

GO:0005575  cellular_component
GO:0005737  cytoplasm
GO:0005739  mitochondrion
GO:0005634  nucleus

Molecular Function

GO:0008168  methyltransferase activity
GO:0003674  molecular_function
GO:0016740  transferase activity
GO:0009019  tRNA (guanine-N1-)-methyltransferase activity