tripartite motif-containing 39

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Synonym

Tfp, RBCC-B30.2, Testis-abundant finger protein, Trim39, E130103K13Rik, Rnf23, tripartite motif protein 39, RING finger protein 23, 1100001D15Rik, KIAA4179, RING-B box-coiled-coil-B30.2, Tripartite motif-containing protein 39, mKIAA4179, tfp

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:27.80 cerebellum:18.40 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:38.20 spine:- retina:64.30 eye:114 artery/aorta:- vein:- lymphnode:- peripheral blood:14.40 spleen:39.50 thymus:- bone marrow:- adipose:- bone:100.20 skin:63.30
GeneChip cerebrum:7.17 cerebellum:7.98 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:6.96 spine:6.91 retina:7.46 eye:7.14 artery/aorta:- vein:6.74 lymphnode:8.03 peripheral blood:- spleen:8.17 thymus:- bone marrow:7.86 adipose:6.93 bone:7.36 skin:7.11
CAGE cerebrum:1.43 cerebellum:- brain stem:0.97 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:1.17 retina:- eye:- artery/aorta:1.43 vein:- lymphnode:1.28 peripheral blood:- spleen:1.49 thymus:2.49 bone marrow:- adipose:- bone:0.63 skin:1.25
RNA-seq cerebrum:2.33 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:13.80 prostate:- ovary:- testis:22.20 heart:- muscle:- esophagus:- stomach:- intestine:- colon:17.60     liver/hepato:-        lung:30.10    bladder:- kidney:8.10 pituitary:25.80 thyroid/parathyroid:- adrenal gland:- pancreas:93.80 breast:32.60 salivary:-
GeneChip uterus:7.43 placenta:7.13 prostate:7.61 ovary:7.21 testis:8.34 heart:6.64 muscle:6.64 esophagus:- stomach:6.92 intestine:7.29 colon:- liver/hepato:6.86 lung:7.41 bladder:7.08 kidney:7.01 pituitary:8.87 thyroid/parathyroid:- adrenal gland:8.07 pancreas:7.25 breast:6.90 salivary:8.19
CAGE uterus:1.58 placenta:1.47 prostate:2.26 ovary:1.51 testis:2.36 heart:- muscle:- esophagus:- stomach:1.35 intestine:1.29 colon:1.19     liver/hepato:1.45    lung:1.17 bladder:1.08 kidney:- pituitary:2.98 thyroid/parathyroid:- adrenal gland:1.55 pancreas:2.03 breast:2.11 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.45 esophagus:- stomach:- intestine:- colon:-     liver/hepato:2.26        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_024468
Gene ID 79263
Unigene ID Mm.40624
Probe set ID 1418851_at  [Mouse430_2]
Ensembl ID ENSMUSG00000045409

Orthologous Gene

Human[2]  NM_001199119, NM_021253, NM_172016
Rat[1]  NM_213562, NM_021253, NM_172016

Chromosomal Region

-

Gene Family (Interpro ID)

IPR001870  B302 (SPRY)-like
IPR003879  Butyrophylin-like
IPR003877  SPla/RYanodine receptor SPRY
IPR018355  SPla/RYanodine receptor subgroup
IPR000315  Zinc finger, B-box

Link to Pubmed  (Pubmed ID)

8889548
10349636
11006080
11042159
11076861
11217851
12466851
12477932
14610273
15489334
15618518
16141072
16141073
18287559
18799693

Gene Ontology  (GO ID)

Biological Process

GO:0006915  apoptosis

Cellular Component

GO:0005737  cytoplasm
GO:0005622  intracellular
GO:0005739  mitochondrion

Molecular Function

GO:0042802  identical protein binding
GO:0016874  ligase activity
GO:0046872  metal ion binding
GO:0008270  zinc ion binding