cadherin 5, type 2 (vascular endothelium)

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Synonym

VE-cadherin, 7B4 antigen, CD144, Cadherin-5 precursor, Vascular endothelial-cadherin, 7B4, CD144 antigen, CDH5

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:53.30

cerebellum:50.40

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:61.30

spine:112.30

retina:-

eye:11.80

artery/aorta:629.50

vein:133.30

lymphnode:-

peripheral blood:-

spleen:18.90

thymus:38.70

bone marrow:-

adipose:-

bone:89.60

skin:19.20

GeneChip

cerebrum:4.90

cerebellum:4.25

brain stem:5.19

corpus callosum/glia:4.74

pineal gland:-

peripheral nerve:6.41

spine:4.88

retina:-

eye:-

artery/aorta:6.56

vein:7.03

lymphnode:6.12

peripheral blood:-

spleen:6.59

thymus:4.68

bone marrow:4.96

adipose:8.28

bone:-

skin:6.90

CAGE

cerebrum:3.00

cerebellum:-

brain stem:2.94

corpus callosum/glia:2.76

pineal gland:2.72

peripheral nerve:-

spine:2.94

retina:-

eye:-

artery/aorta:3.54

vein:4.33

lymphnode:3.26

peripheral blood:-

spleen:3.71

thymus:1.84

bone marrow:-

adipose:5.22

bone:-

skin:-

RNA-seq

cerebrum:2.44

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:4.49

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:5.76

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:136.70

placenta:448.10

prostate:33.80

ovary:37.30

testis:26

heart:51.10

muscle:-

esophagus:-

stomach:42.50

intestine:64.80

colon:-

liver/hepato:-

lung:63.50

bladder:-

kidney:10.40

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:17.80

breast:46.50

salivary:-

GeneChip

uterus:6.46

placenta:9.06

prostate:5.47

ovary:5.87

testis:5.22

heart:7.96

muscle:6.76

esophagus:5.78

stomach:6.44

intestine:6.72

colon:6.40

liver/hepato:6.14

lung:9.17

bladder:-

kidney:6.24

pituitary:4.64

thyroid/parathyroid:6.80

adrenal gland:6.41

pancreas:5.08

breast:6.90

salivary:4.88

CAGE

uterus:4.08

placenta:5.49

prostate:3.61

ovary:3.41

testis:2.99

heart:4.77

muscle:4.30

esophagus:3.50

stomach:-

intestine:2.74

colon:3.17

liver/hepato:3.70

lung:5.03

bladder:3.82

kidney:3.40

pituitary:2.28

thyroid/parathyroid:3.50

adrenal gland:-

pancreas:2.48

breast:4.66

salivary:2.50

RNA-seq

uterus:-

placenta:-

prostate:3.93

ovary:2.76

testis:3.54

heart:4.29

muscle:3.35

esophagus:-

stomach:-

intestine:-

colon:4.33

liver/hepato:2.71

lung:7.01

bladder:-

kidney:2.96

pituitary:-

thyroid/parathyroid:3.59

adrenal gland:4.76

pancreas:-

breast:4.96

salivary:-

IDs

Refseq ID	NM_001795
Gene ID	1003
Unigene ID	Hs.76206
Probe set ID	204677_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000179776
GTEx ID	ENSG00000179776

Orthologous Gene

Mouse[2]	NM_009868
Rat[1]	NM_001107407

Chromosomal Region

16q21 [66,400,533 - 66,438,686]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR002126	Cadherin
IPR015919	Cadherin-like

GO:0034332	adherens junction organization
GO:0001955	blood vessel maturation
GO:0034329	cell junction assembly
GO:0045216	cell-cell junction organization
GO:0007156	homophilic cell adhesion
GO:0008285	negative regulation of cell proliferation

GO:0030054	cell junction
GO:0005911	cell-cell junction
GO:0016021	integral to membrane
GO:0016020	membrane
GO:0005886	plasma membrane
GO:0005923	tight junction

GO:0008013	beta-catenin binding
GO:0005509	calcium ion binding
GO:0005515	protein binding
GO:0019903	protein phosphatase binding
GO:0005102	receptor binding

cadherin 5, type 2 (vascular endothelium)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function