cadherin 13, H-cadherin (heart)

Synonym

P105, CDH13, Heart-cadherin, cadherin 13, H-cadherin (heart), CDHH, Cadherin-13 precursor, T-cad, Truncated-cadherin, H-cadherin, T-cadherin

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

nodata

GeneChip

nodata

CAGE

cerebrum:2.76

cerebellum:-

brain stem:1.74

corpus callosum/glia:2.11

pineal gland:1.08

peripheral nerve:-

spine:2.49

retina:-

eye:-

artery/aorta:5.35

vein:2.95

lymphnode:2.02

peripheral blood:-

spleen:0.92

thymus:0.86

bone marrow:-

adipose:3.79

bone:-

skin:-

RNA-seq

cerebrum:3.06

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:2.24

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:4.01

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

nodata

GeneChip

nodata

CAGE

uterus:4.69

placenta:2.06

prostate:2.41

ovary:2.46

testis:1.90

heart:4.34

muscle:3.85

esophagus:2.52

stomach:-

intestine:1.48

colon:2.13

liver/hepato:0.78

lung:2.96

bladder:2.77

kidney:2.11

pituitary:0.50

thyroid/parathyroid:1.65

adrenal gland:-

pancreas:0

breast:3.22

salivary:1.39

RNA-seq

uterus:-

placenta:-

prostate:1.81

ovary:1.75

testis:2.70

heart:5.78

muscle:3.13

esophagus:-

stomach:-

intestine:-

colon:3.16

liver/hepato:0.00

lung:3.73

bladder:-

kidney:1.48

pituitary:-

thyroid/parathyroid:2.19

adrenal gland:3.37

pancreas:-

breast:3.68

salivary:-

IDs

Refseq ID	NM_001257
Gene ID	1012
Unigene ID	-
Probe set ID	-
Ensembl ID	ENSG00000140945
GTEx ID	ENSG00000140945

Orthologous Gene

Mouse[2]	NM_019707
Rat[1]	NM_138889

Chromosomal Region

16q23.3 [82,660,663 - 83,829,174]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR002126	Cadherin
IPR015919	Cadherin-like

Gene Ontology (GO ID)

Biological Process

GO:0034332	adherens junction organization
GO:0016339	calcium-dependent cell-cell adhesion
GO:0034329	cell junction assembly
GO:0045216	cell-cell junction organization
GO:0043542	endothelial cell migration
GO:0007156	homophilic cell adhesion
GO:0043616	keratinocyte proliferation
GO:0030032	lamellipodium assembly
GO:0051668	localization within membrane
GO:0055096	low-density lipoprotein mediated signaling
GO:0007162	negative regulation of cell adhesion
GO:0008285	negative regulation of cell proliferation
GO:0050850	positive regulation of calcium-mediated signaling
GO:0030335	positive regulation of cell migration
GO:0001954	positive regulation of cell-matrix adhesion
GO:0001938	positive regulation of endothelial cell proliferation
GO:0050927	positive regulation of positive chemotaxis
GO:0048661	positive regulation of smooth muscle cell proliferation
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0016601	Rac protein signal transduction
GO:0030100	regulation of endocytosis
GO:0042058	regulation of epidermal growth factor receptor signaling pathway
GO:0007266	Rho protein signal transduction
GO:0002040	sprouting angiogenesis

Cellular Component

GO:0031225	anchored to membrane
GO:0005901	caveola
GO:0005737	cytoplasm
GO:0005615	extracellular space
GO:0043005	neuron projection
GO:0005886	plasma membrane

Molecular Function

GO:0055100	adiponectin binding
GO:0045296	cadherin binding
GO:0005509	calcium ion binding
GO:0030169	low-density lipoprotein binding

cadherin 13, H-cadherin (heart)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function