cadherin 16, KSP-cadherin

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Synonym

cadherin 16, KSP-cadherin, Ksp-cadherin, Cadherin-16 precursor, CDH16, UNQ695/PRO1340, Kidney-specific cadherin

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:10.70 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:5.14 cerebellum:5.05 brain stem:5.29 corpus callosum/glia:4.87 pineal gland:- peripheral nerve:4.98 spine:5.05 retina:- eye:- artery/aorta:5.31 vein:5.32 lymphnode:4.98 peripheral blood:- spleen:4.62 thymus:4.92 bone marrow:5.59 adipose:5.22 bone:- skin:5.46
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:0.18 lymphnode:0 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.01 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:3.60 prostate:- ovary:- testis:4.30 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:551.10 pituitary:- thyroid/parathyroid:655 adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4.98 placenta:4.92 prostate:5.02 ovary:5.28 testis:4.93 heart:5.07 muscle:5.35 esophagus:5.86 stomach:4.95 intestine:5.25 colon:5.16 liver/hepato:5.14 lung:4.95 bladder:- kidney:10.47 pituitary:5.08 thyroid/parathyroid:7.51 adrenal gland:4.95 pancreas:5.63 breast:4.82 salivary:5.02
CAGE uterus:0.69 placenta:0.08 prostate:0.49 ovary:0.72 testis:0.50 heart:0 muscle:0 esophagus:0 stomach:- intestine:1.48 colon:0.92     liver/hepato:0    lung:0 bladder:0.09 kidney:6.06 pituitary:0 thyroid/parathyroid:3.84 adrenal gland:- pancreas:0 breast:0 salivary:0.36
RNA-seq uterus:- placenta:- prostate:0.41 ovary:0.48 testis:0.13 heart:0.00 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0        lung:0.00    bladder:- kidney:7.38 pituitary:- thyroid/parathyroid:3.34 adrenal gland:0.00 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_004062
Gene ID 1014
Unigene ID Hs.513660
Probe set ID 206517_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000166589
GTEx ID ENSG00000166589

Orthologous Gene

Mouse[1]  NM_007663
Rat [0]  

Chromosomal Region

16q22.1  [66,942,025  -  66,952,860]

Gene Family (Interpro ID)

IPR002126  Cadherin
IPR015919  Cadherin-like

Link to Pubmed  (Pubmed ID)

7615566
8125298
9721215
10409308
10828602
12477932
12851251
12975309
15023525
15489334
15670782
15886705
17895753
18343407
21988832
22028439

Gene Ontology  (GO ID)

Biological Process

GO:0007155  cell adhesion
GO:0007156  homophilic cell adhesion

Cellular Component

GO:0016021  integral to membrane
GO:0005886  plasma membrane

Molecular Function

GO:0005509  calcium ion binding