tripartite motif-containing 22

Synonym

Staf-50, STAF50, tripartite motif-containing 22, TRIM22, RING finger protein 94, GPSTAF50, RNF94, 50 kDa-stimulated trans-acting factor, Tripartite motif-containing protein 22

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:21.30

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:61.30

spine:224.60

retina:-

eye:23.50

artery/aorta:89.90

vein:266.60

lymphnode:101.10

peripheral blood:200.40

spleen:397

thymus:438

bone marrow:137.80

adipose:80.70

bone:89.60

skin:76.80

GeneChip

cerebrum:5.75

cerebellum:4.38

brain stem:6.13

corpus callosum/glia:6.87

pineal gland:-

peripheral nerve:8.18

spine:7.68

retina:-

eye:-

artery/aorta:7.40

vein:7.59

lymphnode:9.18

peripheral blood:-

spleen:9.88

thymus:9.30

bone marrow:7.65

adipose:8.03

bone:-

skin:6.87

CAGE

cerebrum:2.65

cerebellum:-

brain stem:3.26

corpus callosum/glia:3.22

pineal gland:2.63

peripheral nerve:-

spine:3.98

retina:-

eye:-

artery/aorta:3.69

vein:4.66

lymphnode:4.70

peripheral blood:-

spleen:4.69

thymus:4.22

bone marrow:-

adipose:4.37

bone:-

skin:-

RNA-seq

cerebrum:2.23

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:6.19

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.38

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:54.70

placenta:25.50

prostate:-

ovary:-

testis:13

heart:12.80

muscle:-

esophagus:-

stomach:42.50

intestine:97.20

colon:50.90

liver/hepato:-

lung:132

bladder:628.10

kidney:10.40

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:8.90

breast:27.90

salivary:-

GeneChip

uterus:8.44

placenta:7.15

prostate:8.02

ovary:8.67

testis:5.50

heart:7.67

muscle:6.04

esophagus:7.03

stomach:7.74

intestine:7.23

colon:6.85

liver/hepato:6.91

lung:8.97

bladder:-

kidney:6.17

pituitary:5.70

thyroid/parathyroid:6.86

adrenal gland:7.01

pancreas:5.62

breast:7.71

salivary:7.24

CAGE

uterus:3.65

placenta:3.02

prostate:3.88

ovary:3.89

testis:2.75

heart:3.53

muscle:2.73

esophagus:3.69

stomach:-

intestine:3.26

colon:2.93

liver/hepato:2.53

lung:4.25

bladder:3.63

kidney:3.11

pituitary:2.80

thyroid/parathyroid:3.49

adrenal gland:-

pancreas:1.59

breast:2.87

salivary:3.44

RNA-seq

uterus:-

placenta:-

prostate:4.42

ovary:4.68

testis:3.56

heart:3.82

muscle:2.07

esophagus:-

stomach:-

intestine:-

colon:3.53

liver/hepato:1.90

lung:5.25

bladder:-

kidney:3.28

pituitary:-

thyroid/parathyroid:3.30

adrenal gland:4.79

pancreas:-

breast:3.70

salivary:-

IDs

Refseq ID	NM_006074
Gene ID	10346
Unigene ID	Hs.501778
Probe set ID	213293_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000132274
GTEx ID	ENSG00000132274

Orthologous Gene

Mouse [0]
Rat [0]

Chromosomal Region

11p15.4 [5,710,919 - 5,758,319]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR001870	B302 (SPRY)-like
IPR003879	Butyrophylin-like
IPR003877	SPla/RYanodine receptor SPRY
IPR018355	SPla/RYanodine receptor subgroup
IPR000315	Zinc finger, B-box

GO:0051607	defense response to virus
GO:0006955	immune response
GO:0070206	protein trimerization
GO:0016567	protein ubiquitination
GO:0006355	regulation of transcription, DNA-dependent
GO:0009615	response to virus
GO:0006351	transcription, DNA-dependent
GO:0019048	virus-host interaction

GO:0015030	Cajal body
GO:0005737	cytoplasm
GO:0005794	Golgi apparatus
GO:0043231	intracellular membrane-bounded organelle
GO:0016607	nuclear speck
GO:0005634	nucleus

GO:0016874	ligase activity
GO:0003714	transcription corepressor activity
GO:0003700	transcription factor activity
GO:0008270	zinc ion binding

tripartite motif-containing 22

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function