SEC24 family, member B (S. cerevisiae)

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Synonym

MGC48822, SEC24-related protein B, Protein transport protein Sec24B, SEC24B, SEC24

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:73.50 cerebellum:25.20 brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:88.20 artery/aorta:30 vein:266.60 lymphnode:80.90 peripheral blood:18.20 spleen:113.40 thymus:51.50 bone marrow:19.70 adipose:121 bone:51.20 skin:72
GeneChip cerebrum:6.47 cerebellum:6.52 brain stem:6.65 corpus callosum/glia:6.58 pineal gland:- peripheral nerve:7.17 spine:6.79 retina:- eye:- artery/aorta:7.15 vein:6.97 lymphnode:7.02 peripheral blood:- spleen:7.28 thymus:8.66 bone marrow:6.52 adipose:7.27 bone:- skin:7.52
CAGE cerebrum:4.13 cerebellum:- brain stem:4.09 corpus callosum/glia:4.16 pineal gland:4.44 peripheral nerve:- spine:4.24 retina:- eye:- artery/aorta:4.56 vein:4.49 lymphnode:4.27 peripheral blood:- spleen:4.03 thymus:4.56 bone marrow:- adipose:4.45 bone:- skin:-
RNA-seq cerebrum:2.04 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.59 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.25 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:58.30 prostate:112.60 ovary:37.30 testis:17.30 heart:51.10 muscle:20.10 esophagus:- stomach:21.20 intestine:- colon:42.40     liver/hepato:21.10        lung:63.50    bladder:- kidney:124.80 pituitary:116 thyroid/parathyroid:- adrenal gland:- pancreas:88.90 breast:111.50 salivary:-
GeneChip uterus:7.77 placenta:7.72 prostate:7.95 ovary:7.73 testis:6.69 heart:6.94 muscle:7.28 esophagus:7.19 stomach:6.83 intestine:7.01 colon:6.24 liver/hepato:7.73 lung:7.07 bladder:- kidney:6.59 pituitary:6.90 thyroid/parathyroid:7.12 adrenal gland:7.02 pancreas:6.25 breast:7.33 salivary:6.50
CAGE uterus:4.52 placenta:4.31 prostate:4.31 ovary:4.32 testis:3.86 heart:4.39 muscle:4.43 esophagus:4.24 stomach:- intestine:4.10 colon:4.26     liver/hepato:4.23    lung:4.40 bladder:4.50 kidney:3.94 pituitary:4.54 thyroid/parathyroid:3.97 adrenal gland:- pancreas:3.95 breast:4.83 salivary:4.00
RNA-seq uterus:- placenta:- prostate:2.32 ovary:1.17 testis:1.25 heart:0.88 muscle:1.08 esophagus:- stomach:- intestine:- colon:1.95     liver/hepato:0.62        lung:1.82    bladder:- kidney:0.61 pituitary:- thyroid/parathyroid:1.32 adrenal gland:1.65 pancreas:- breast:0.83 salivary:-

Gene Information

IDs

Refseq ID NM_006323
Gene ID 10427
Unigene ID Hs.292472
Probe set ID 202798_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000138802
GTEx ID ENSG00000138802

Orthologous Gene

Mouse[2]  NM_207209
Rat[1]  NM_001106474

Chromosomal Region

4q25  [110,354,928  -  110,461,612]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10075675
10329445
11031247
11252894
12477932
16094384
16344560
17081983
17474147
17499046
18713835
19542561
19706601
20332099
20562859
20811636
21139048
21145461
22323290
22939629
23592378

Gene Ontology  (GO ID)

Biological Process

GO:0019886  antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0002474  antigen processing and presentation of peptide antigen via MHC class I
GO:0044267  cellular protein metabolic process
GO:0048208  COPII coating of ER-derived vesicle
GO:0006888  ER to Golgi vesicle-mediated transport
GO:0006886  intracellular protein transport
GO:0016044  membrane organization
GO:0043687  post-translational protein modification
GO:0018279  protein amino acid N-linked glycosylation via asparagine
GO:0016192  vesicle-mediated transport

Cellular Component

GO:0030127  COPII vesicle coat
GO:0005829  cytosol
GO:0005789  endoplasmic reticulum membrane
GO:0012507  ER to Golgi transport vesicle membrane
GO:0000139  Golgi membrane
GO:0016020  membrane
GO:0048471  perinuclear region of cytoplasm

Molecular Function

GO:0005515  protein binding
GO:0005215  transporter activity
GO:0008270  zinc ion binding