vesicle transport through interaction with t-SNAREs homolog 1B (yeast)

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Synonym

Vti1-rp1, Vesicle transport v-SNARE protein Vti1-like 1, VTI1, VTI1L1, VTI1L, VTI1B, VTI2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:301 cerebellum:365.20 brain stem:- corpus callosum/glia:437.40 pineal gland:296.70 peripheral nerve:214.70 spine:112.30 retina:237.30 eye:164.60 artery/aorta:299.80 vein:66.60 lymphnode:91 peripheral blood:291.50 spleen:264.70 thymus:193.30 bone marrow:98.40 adipose:282.30 bone:255.90 skin:196.80
GeneChip cerebrum:8.69 cerebellum:8.07 brain stem:8.66 corpus callosum/glia:8.41 pineal gland:- peripheral nerve:8.09 spine:8.66 retina:- eye:- artery/aorta:8.16 vein:8.15 lymphnode:7.61 peripheral blood:- spleen:7.55 thymus:7.48 bone marrow:7.89 adipose:8.85 bone:- skin:8.15
CAGE cerebrum:4.37 cerebellum:- brain stem:4.15 corpus callosum/glia:4.07 pineal gland:4.55 peripheral nerve:- spine:4.63 retina:- eye:- artery/aorta:4.14 vein:4.18 lymphnode:3.83 peripheral blood:- spleen:3.98 thymus:3.19 bone marrow:- adipose:4.32 bone:- skin:-
RNA-seq cerebrum:5.19 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.79 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:5.45 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:236.90 placenta:240.40 prostate:1689.70 ovary:186.30 testis:125.50 heart:344.80 muscle:40.20 esophagus:- stomach:403.60 intestine:259.20 colon:84.80     liver/hepato:147.80        lung:215.10    bladder:376.80 kidney:478.30 pituitary:- thyroid/parathyroid:327.50 adrenal gland:711 pancreas:133.40 breast:455.40 salivary:328.40
GeneChip uterus:7.99 placenta:8.36 prostate:8.34 ovary:8.10 testis:8.80 heart:8.30 muscle:8.10 esophagus:8.40 stomach:8 intestine:8.16 colon:8.19 liver/hepato:7.85 lung:8.08 bladder:- kidney:8.46 pituitary:7.78 thyroid/parathyroid:8.43 adrenal gland:7.64 pancreas:8.13 breast:8.02 salivary:8.75
CAGE uterus:3.55 placenta:4.19 prostate:4.08 ovary:3.71 testis:4.13 heart:4.65 muscle:4.38 esophagus:4.25 stomach:- intestine:4.21 colon:4.20     liver/hepato:4.18    lung:3.99 bladder:4.07 kidney:4.35 pituitary:3.85 thyroid/parathyroid:4.40 adrenal gland:- pancreas:4.48 breast:4.72 salivary:4.04
RNA-seq uterus:- placenta:- prostate:5.06 ovary:4.71 testis:5.28 heart:4.50 muscle:4.12 esophagus:- stomach:- intestine:- colon:5.37     liver/hepato:4.32        lung:4.40    bladder:- kidney:4.85 pituitary:- thyroid/parathyroid:5.23 adrenal gland:4.79 pancreas:- breast:6.03 salivary:-

Gene Information

IDs

Refseq ID NM_006370
Gene ID 10490
Unigene ID Hs.226007
Probe set ID 209452_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000100568
GTEx ID ENSG00000100568

Orthologous Gene

Mouse[1]  NM_016800
Rat[1]  NM_016800

Chromosomal Region

14q24.1  [68,113,792  -  68,141,548]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

9446565
9636656
10683148
11101518
11252894
11278762
11786915
11839770
11927603
12067063
12114520
12175335
12477932
12853575
14769786
15371541
15489334
16169070
18570918
19224922
20089838
20562859
21139048
21562157
21674799
21890473
22875976
23000965

Gene Ontology  (GO ID)

Biological Process

GO:0000046  autophagic vacuole fusion
GO:0008283  cell proliferation
GO:0006886  intracellular protein transport
GO:0006944  membrane fusion
GO:0006904  vesicle docking during exocytosis
GO:0016192  vesicle-mediated transport

Cellular Component

GO:0005794  Golgi apparatus
GO:0016021  integral to membrane
GO:0031902  late endosome membrane
GO:0005765  lysosomal membrane
GO:0048471  perinuclear region of cytoplasm
GO:0031201  SNARE complex