vesicle amine transport protein 1 homolog (T. californica)

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Synonym

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, FLJ20230, VATI

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:500.10 cerebellum:88.20 brain stem:- corpus callosum/glia:1166.50 pineal gland:- peripheral nerve:276 spine:449.20 retina:- eye:205.70 artery/aorta:719.40 vein:733.10 lymphnode:91 peripheral blood:929.10 spleen:491.60 thymus:953.40 bone marrow:78.70 adipose:282.30 bone:690.90 skin:523.20
GeneChip cerebrum:7.92 cerebellum:7.27 brain stem:8.65 corpus callosum/glia:7.99 pineal gland:- peripheral nerve:9.76 spine:8.44 retina:- eye:- artery/aorta:8.76 vein:8.76 lymphnode:8.15 peripheral blood:- spleen:7.83 thymus:8.13 bone marrow:8.42 adipose:8.96 bone:- skin:9.03
CAGE cerebrum:3.70 cerebellum:- brain stem:4.31 corpus callosum/glia:4.34 pineal gland:2.99 peripheral nerve:- spine:4.54 retina:- eye:- artery/aorta:5.17 vein:5.09 lymphnode:4.18 peripheral blood:- spleen:4.03 thymus:4.81 bone marrow:- adipose:5.78 bone:- skin:-
RNA-seq cerebrum:4.18 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:5.97 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:7.63 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:401 placenta:116.60 prostate:349.20 ovary:111.80 testis:281.20 heart:178.80 muscle:- esophagus:- stomach:106.20 intestine:712.80 colon:178.10     liver/hepato:95        lung:322.60    bladder:628.10 kidney:270.30 pituitary:116 thyroid/parathyroid:982.50 adrenal gland:1828.30 pancreas:80 breast:241.60 salivary:328.40
GeneChip uterus:8.49 placenta:7.74 prostate:8.13 ovary:8.56 testis:8.78 heart:8.21 muscle:7.54 esophagus:8.94 stomach:8.16 intestine:8.17 colon:8.37 liver/hepato:7.93 lung:9.01 bladder:- kidney:8.42 pituitary:9.06 thyroid/parathyroid:8.45 adrenal gland:9.56 pancreas:7.88 breast:8.91 salivary:8.42
CAGE uterus:5.00 placenta:4.62 prostate:4.95 ovary:5.55 testis:5.13 heart:4.71 muscle:3.69 esophagus:5.05 stomach:- intestine:4.28 colon:4.63     liver/hepato:4.23    lung:5.55 bladder:5.09 kidney:4.61 pituitary:4.45 thyroid/parathyroid:4.45 adrenal gland:- pancreas:4.42 breast:6.24 salivary:4.35
RNA-seq uterus:- placenta:- prostate:6.80 ovary:7.14 testis:6.38 heart:4.09 muscle:4.38 esophagus:- stomach:- intestine:- colon:6.70     liver/hepato:4.48        lung:6.43    bladder:- kidney:5.33 pituitary:- thyroid/parathyroid:6.04 adrenal gland:5.46 pancreas:- breast:6.27 salivary:-

Gene Information

IDs

Refseq ID NM_006373
Gene ID 10493
Unigene ID Hs.514199
Probe set ID 208626_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000108828
GTEx ID ENSG00000108828

Orthologous Gene

Mouse[2]  NM_012037
Rat [0]  

Chromosomal Region

17q21.31  [41,166,622  -  41,174,459]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7545954
7581362
7774926
7987831
8076819
8938427
12477932
14702039
15489334
17105775
17255364
19056867
19508442
19615732
20000738
20858461
21139048
21319273
21890473
21906983
22053931
22505724
22863883
22939629
23000965
23166591
23874603
24244333
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0010637  negative regulation of mitochondrial fusion

Cellular Component

GO:0016021  integral to membrane
GO:0005741  mitochondrial outer membrane

Molecular Function

GO:0016491  oxidoreductase activity
GO:0008270  zinc ion binding