nuclear receptor coactivator 2

Synonym

TIF2, Nuclear receptor coactivator 2, MGC138808, Transcriptional intermediary factor 2, NCoA-2, nuclear receptor coactivator 2, NCOA2

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:53.30

cerebellum:88.20

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:153.40

spine:112.30

retina:237.30

eye:11.80

artery/aorta:60

vein:-

lymphnode:131.40

peripheral blood:36.40

spleen:37.80

thymus:51.50

bone marrow:137.80

adipose:40.30

bone:12.80

skin:76.80

GeneChip

cerebrum:6.47

cerebellum:6.31

brain stem:6.61

corpus callosum/glia:6.09

pineal gland:-

peripheral nerve:6.73

spine:6.44

retina:-

eye:-

artery/aorta:6.26

vein:5.70

lymphnode:6.88

peripheral blood:-

spleen:7.08

thymus:7.18

bone marrow:7.19

adipose:6.49

bone:-

skin:6.83

CAGE

cerebrum:3.32

cerebellum:-

brain stem:3.22

corpus callosum/glia:3.18

pineal gland:3.54

peripheral nerve:-

spine:3.25

retina:-

eye:-

artery/aorta:3.46

vein:3.39

lymphnode:3.52

peripheral blood:-

spleen:3.47

thymus:3.37

bone marrow:-

adipose:3.30

bone:-

skin:-

RNA-seq

cerebrum:2.49

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:2.23

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:2.04

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:18.20

placenta:36.40

prostate:45.10

ovary:149.10

testis:86.50

heart:51.10

muscle:20.10

esophagus:-

stomach:212.40

intestine:32.40

colon:76.30

liver/hepato:73.90

lung:29.30

bladder:125.60

kidney:20.80

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:26.70

breast:74.30

salivary:-

GeneChip

uterus:6.80

placenta:7.50

prostate:7.96

ovary:6.96

testis:7.43

heart:6.47

muscle:6.12

esophagus:6.78

stomach:6.32

intestine:6.30

colon:5.66

liver/hepato:7.42

lung:6.14

bladder:-

kidney:6.76

pituitary:7.14

thyroid/parathyroid:6.97

adrenal gland:6.64

pancreas:4.69

breast:6.86

salivary:6.57

CAGE

uterus:3.61

placenta:3.51

prostate:3.50

ovary:3.16

testis:3.63

heart:3.27

muscle:2.93

esophagus:3.06

stomach:-

intestine:4.08

colon:3.66

liver/hepato:3.84

lung:3.66

bladder:3.45

kidney:3.28

pituitary:3.66

thyroid/parathyroid:3.15

adrenal gland:-

pancreas:2.98

breast:3.54

salivary:3.52

RNA-seq

uterus:-

placenta:-

prostate:2.73

ovary:2.40

testis:2.65

heart:2.84

muscle:1.68

esophagus:-

stomach:-

intestine:-

colon:1.86

liver/hepato:1.94

lung:2.01

bladder:-

kidney:2.31

pituitary:-

thyroid/parathyroid:2.42

adrenal gland:1.68

pancreas:-

breast:2.11

salivary:-

IDs

Refseq ID	NM_006540
Gene ID	10499
Unigene ID	Hs.446678
Probe set ID	212867_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000140396
GTEx ID	ENSG00000140396

Orthologous Gene

Mouse[2]	NM_001077695, NM_008678
Rat[1]	NM_031822, NM_008678

Chromosomal Region

8q13.3 [71,021,997 - 71,316,040]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000014

PAS

Gene Ontology (GO ID)

Biological Process

GO:0030521	androgen receptor signaling pathway
GO:0044255	cellular lipid metabolic process
GO:0000122	negative regulation of transcription from RNA polymerase II promoter
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0006355	regulation of transcription, DNA-dependent
GO:0006351	transcription, DNA-dependent

Cellular Component

GO:0005737	cytoplasm
GO:0005654	nucleoplasm
GO:0005634	nucleus

Molecular Function

GO:0003682	chromatin binding
GO:0004402	histone acetyltransferase activity
GO:0016922	ligand-dependent nuclear receptor binding
GO:0030374	ligand-dependent nuclear receptor transcription coactivator activity
GO:0035257	nuclear hormone receptor binding
GO:0005515	protein binding
GO:0046983	protein dimerization activity
GO:0004871	signal transducer activity
GO:0030375	thyroid hormone receptor coactivator activity
GO:0003713	transcription coactivator activity

nuclear receptor coactivator 2

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function