PDZ and LIM domain 5

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Synonym

Enigma homolog, LIM, ENH, PDZ and LIM domain protein 5, Enigma-like PDZ and LIM domains protein, PDZ and LIM domain 5, L9, PDLIM5

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:101.90 cerebellum:12.60 brain stem:- corpus callosum/glia:145.80 pineal gland:- peripheral nerve:184 spine:- retina:- eye:123.40 artery/aorta:419.70 vein:266.60 lymphnode:30.30 peripheral blood:- spleen:56.70 thymus:12.90 bone marrow:137.80 adipose:443.70 bone:204.70 skin:187.20
GeneChip cerebrum:3.36 cerebellum:3.17 brain stem:3.28 corpus callosum/glia:3.36 pineal gland:- peripheral nerve:3.62 spine:3.38 retina:- eye:- artery/aorta:4.77 vein:7.01 lymphnode:3.55 peripheral blood:- spleen:3.56 thymus:3.42 bone marrow:3.47 adipose:3.48 bone:- skin:4.31
CAGE cerebrum:3.86 cerebellum:- brain stem:3.71 corpus callosum/glia:3.87 pineal gland:4.10 peripheral nerve:- spine:4.31 retina:- eye:- artery/aorta:5.82 vein:4.67 lymphnode:4.38 peripheral blood:- spleen:4.36 thymus:2.79 bone marrow:- adipose:4.87 bone:- skin:-
RNA-seq cerebrum:0.22 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.38 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.10 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:410.10 placenta:276.90 prostate:281.60 ovary:74.50 testis:64.90 heart:740.80 muscle:1989 esophagus:- stomach:85 intestine:97.20 colon:144.20     liver/hepato:158.30        lung:112.40    bladder:125.60 kidney:72.80 pituitary:232 thyroid/parathyroid:163.70 adrenal gland:152.40 pancreas:160 breast:306.70 salivary:-
GeneChip uterus:4.39 placenta:3.68 prostate:4.28 ovary:3.79 testis:3.18 heart:8.34 muscle:10.73 esophagus:6.74 stomach:3.63 intestine:4.97 colon:3.52 liver/hepato:3.66 lung:3.74 bladder:- kidney:3.37 pituitary:3.26 thyroid/parathyroid:3.64 adrenal gland:3.83 pancreas:3.38 breast:3.77 salivary:3.61
CAGE uterus:5.52 placenta:5.22 prostate:4.84 ovary:4.74 testis:4.04 heart:6.70 muscle:7.10 esophagus:5.00 stomach:- intestine:5.10 colon:4.57     liver/hepato:4.85    lung:4.08 bladder:5.25 kidney:4.91 pituitary:4.46 thyroid/parathyroid:4.06 adrenal gland:- pancreas:4.40 breast:4.75 salivary:5.21
RNA-seq uterus:- placenta:- prostate:0.00 ovary:0.52 testis:0.94 heart:0.00 muscle:1.31 esophagus:- stomach:- intestine:- colon:1.22     liver/hepato:0.72        lung:1.76    bladder:- kidney:0.38 pituitary:- thyroid/parathyroid:4.65 adrenal gland:0 pancreas:- breast:3.97 salivary:-

Gene Information

IDs

Refseq ID NM_001011516
Gene ID 10611
Unigene ID Hs.480311
Probe set ID 221994_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000163110
GTEx ID ENSG00000163110

Orthologous Gene

Mouse[10]  NM_001190853, NM_001190857, NM_019808, NM_019809, NM_022554
Rat [0]  

Chromosomal Region

4q22.3  [95,373,037  -  95,589,377]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7698749
8889548
8940095
10429367
10737800
10833443
11076863
11230166
11256614
12477932
12665800
14743183
15334068
15342556
15346770
15362566
15489334
15489336
15555569
16044170
16189514
16213469
16344560
16381901
16549780
16595163
16713569
17081983
17287082
18021463
18197271
18296710
18456508
18496208
18496210
19328558
19448850
19596686
19636345
19738201
19767753
20564319
20878950
21139048
21266195
21890473
21906983
22118674
22589738
22741436
22863883
22939629
23031404
24064681
24457600

Gene Ontology  (GO ID)

Biological Process

GO:0051963  regulation of synaptogenesis

Cellular Component

GO:0015629  actin cytoskeleton
GO:0030054  cell junction
GO:0005829  cytosol
GO:0016020  membrane
GO:0043005  neuron projection
GO:0005886  plasma membrane
GO:0014069  postsynaptic density
GO:0045211  postsynaptic membrane

Molecular Function

GO:0003779  actin binding
GO:0042805  actinin binding
GO:0005080  protein kinase C binding
GO:0008270  zinc ion binding