apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2

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Synonym

ARCD1, APOBEC2, Probable C->U-editing enzyme APOBEC-2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:11.80 artery/aorta:30 vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:121 bone:- skin:9.60
GeneChip cerebrum:5.34 cerebellum:5.33 brain stem:5.45 corpus callosum/glia:5.16 pineal gland:- peripheral nerve:5.27 spine:5.16 retina:- eye:- artery/aorta:5.55 vein:5.66 lymphnode:5.20 peripheral blood:- spleen:4.90 thymus:5.60 bone marrow:5.65 adipose:5.45 bone:- skin:5.99
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0.56 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0.18 vein:2.54 lymphnode:1.30 peripheral blood:- spleen:0 thymus:1.38 bone marrow:- adipose:1.60 bone:- skin:-
RNA-seq cerebrum:0.10 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.10 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:10.90 prostate:33.80 ovary:- testis:- heart:229.90 muscle:984.40 esophagus:- stomach:- intestine:- colon:-     liver/hepato:10.60        lung:39.10    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:62.20 breast:9.30 salivary:-
GeneChip uterus:5.03 placenta:5.17 prostate:5.01 ovary:5.11 testis:5.50 heart:7.52 muscle:10.78 esophagus:6.99 stomach:5.74 intestine:6.35 colon:5.36 liver/hepato:5.28 lung:5.10 bladder:- kidney:5.16 pituitary:5.18 thyroid/parathyroid:4.99 adrenal gland:5.32 pancreas:6.02 breast:5.01 salivary:5.43
CAGE uterus:0 placenta:0 prostate:0.66 ovary:0 testis:0.52 heart:4.32 muscle:5.77 esophagus:2.12 stomach:- intestine:0.33 colon:0.08     liver/hepato:0    lung:0 bladder:0.40 kidney:0 pituitary:0 thyroid/parathyroid:0.93 adrenal gland:- pancreas:2.86 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.34 ovary:0.10 testis:2.08 heart:6.15 muscle:6.23 esophagus:- stomach:- intestine:- colon:0.38     liver/hepato:0.10        lung:0.21    bladder:- kidney:0.06 pituitary:- thyroid/parathyroid:4.59 adrenal gland:0.37 pancreas:- breast:3.97 salivary:-

Gene Information

IDs

Refseq ID NM_006789
Gene ID 10930
Unigene ID Hs.555915
Probe set ID 206160_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000124701
GTEx ID ENSG00000124701

Orthologous Gene

Mouse[1]  NM_009694
Rat [0]  

Chromosomal Region

6p21.1  [41,021,043  -  41,032,465]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8078915
8125298
8999814
10403781
11698249
12477932
12683974
14574404
15489334
17187054
18974842
19911124
20138841
21469143

Gene Ontology  (GO ID)

Biological Process

GO:0009972  cytidine deamination
GO:0080111  DNA demethylation
GO:0016556  mRNA modification
GO:0006397  mRNA processing

Molecular Function

GO:0004126  cytidine deaminase activity
GO:0003723  RNA binding
GO:0008270  zinc ion binding