tripartite motif-containing 31

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Synonym

TRIM31, HCGI, HCG1, tripartite motif-containing 31, RNF, C6orf13, Tripartite motif-containing protein 31

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:5.90 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:3.34 cerebellum:3.61 brain stem:3.37 corpus callosum/glia:3.39 pineal gland:- peripheral nerve:3.22 spine:3.29 retina:- eye:- artery/aorta:3.27 vein:3.46 lymphnode:3.32 peripheral blood:- spleen:3.14 thymus:3.12 bone marrow:3.50 adipose:3.34 bone:- skin:3.50
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0.18 vein:0 lymphnode:0 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.01 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.08 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.06 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:238 heart:- muscle:- esophagus:- stomach:- intestine:- colon:212     liver/hepato:-        lung:9.80    bladder:125.60 kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:3.21 placenta:3.18 prostate:3.21 ovary:3.24 testis:3.27 heart:3.28 muscle:3.42 esophagus:3.18 stomach:3.74 intestine:3.45 colon:4.36 liver/hepato:3.33 lung:3.41 bladder:- kidney:3.23 pituitary:3.11 thyroid/parathyroid:3.08 adrenal gland:3.14 pancreas:3.53 breast:3.21 salivary:3.51
CAGE uterus:0.09 placenta:0 prostate:0.66 ovary:0 testis:0 heart:0 muscle:0 esophagus:0 stomach:- intestine:2.06 colon:1.78     liver/hepato:0    lung:0 bladder:1.40 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:2.05 ovary:0.09 testis:0.82 heart:0.01 muscle:0 esophagus:- stomach:- intestine:- colon:0.20     liver/hepato:0.06        lung:0.49    bladder:- kidney:0.05 pituitary:- thyroid/parathyroid:0.19 adrenal gland:0 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_007028
Gene ID 11074
Unigene ID Hs.493275
Probe set ID 208170_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000204616
GTEx ID ENSG00000204616

Orthologous Gene

Mouse[1]  NM_146077
Rat[1]  NM_001106376

Chromosomal Region

HSCHR6_MHC_APD  [30,015,058  -  30,017,715]
HSCHR6_MHC_MANN  [30,065,837  -  30,076,039]
6p22.1  [30,070,674  -  30,080,883]
HSCHR6_MHC_SSTO  [30,060,269  -  30,070,469]
HSCHR6_MHC_MCF  [30,149,160  -  30,159,367]
HSCHR6_MHC_DBB  [30,061,002  -  30,071,204]
HSCHR6_MHC_COX  [30,060,592  -  30,070,807]
HSCHR6_MHC_QBL  [30,060,243  -  30,070,446]

Gene Family (Interpro ID)

IPR000315  Zinc finger, B-box
IPR020457  Zinc finger, B-box, chordata

Link to Pubmed  (Pubmed ID)

8125298
8490624
11331580
12477932
14574404
14759258
15489334
16189514
16341674
16702430
16712791
18248090
19549727
19851445
20125193
20211142
21143188
21231912
21302343
22493164
23105109
23417110

Gene Ontology  (GO ID)

Biological Process

GO:0016567  protein ubiquitination

Cellular Component

GO:0005739  mitochondrion

Molecular Function

GO:0016874  ligase activity
GO:0008270  zinc ion binding