LIM domain binding 3

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Synonym

PDLIM6, CYPHER, ldb3z1, KIAA01613, ldb3z4, Protein cypher, ORACLE, Z-band alternatively spliced PDZ-motif protein, KIAA0613, LDB3, ZASP, LIM domain binding 3, LIM domain-binding protein 3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:8.37 cerebellum:5.94 brain stem:8.71 corpus callosum/glia:10.10 pineal gland:- peripheral nerve:5.77 spine:9.27 retina:- eye:- artery/aorta:10.11 vein:10.63 lymphnode:4.82 peripheral blood:- spleen:4.41 thymus:4.71 bone marrow:4.55 adipose:6.25 bone:- skin:7.02
CAGE cerebrum:3.55 cerebellum:- brain stem:4.67 corpus callosum/glia:5.59 pineal gland:0.98 peripheral nerve:- spine:4.73 retina:- eye:- artery/aorta:5.25 vein:4.63 lymphnode:2.53 peripheral blood:- spleen:0.25 thymus:0.23 bone marrow:- adipose:4.40 bone:- skin:-
RNA-seq cerebrum:2.66 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.88 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.58 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:7.03 placenta:5.09 prostate:8.20 ovary:6.05 testis:5.88 heart:11.40 muscle:12.46 esophagus:9.96 stomach:7.67 intestine:7.89 colon:7.76 liver/hepato:4.30 lung:5.60 bladder:- kidney:4.79 pituitary:5.41 thyroid/parathyroid:6.20 adrenal gland:5.74 pancreas:4.21 breast:6.52 salivary:4.51
CAGE uterus:3.98 placenta:1.50 prostate:3.57 ovary:3.18 testis:2.25 heart:7.08 muscle:8.13 esophagus:4.69 stomach:- intestine:2.89 colon:3.79     liver/hepato:0.46    lung:1.97 bladder:3.28 kidney:2.08 pituitary:1.09 thyroid/parathyroid:3.44 adrenal gland:- pancreas:0.94 breast:2.99 salivary:3.13
RNA-seq uterus:- placenta:- prostate:1.95 ovary:0.91 testis:2.76 heart:6.49 muscle:5.41 esophagus:- stomach:- intestine:- colon:2.36     liver/hepato:0.03        lung:0.64    bladder:- kidney:0.68 pituitary:- thyroid/parathyroid:3.24 adrenal gland:2.15 pancreas:- breast:2.75 salivary:-

Gene Information

IDs

Refseq ID NM_001080114
Gene ID 11155
Unigene ID -
Probe set ID 213371_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000122367
GTEx ID ENSG00000122367

Orthologous Gene

Mouse[9]  NM_001039071, NM_001039072, NM_001039074, NM_001039076, NM_011918
Rat[9]  NM_001039071, NM_001039072, NM_001039074, NM_001039076, NM_011918

Chromosomal Region

10q23.2  [88,426,549  -  88,495,825]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8681137
8823300
9734811
10391924
10427098
10727866
11076863
11842093
12477932
14660611
14662268
14702039
15174051
16344560
16385451
16476425
17394203
17987659
18513529
19377068
19472918
20066428
20201937
20301486
20301672
20474083
22349865
22929165
23271734
23996002
24668811

Gene Ontology  (GO ID)

Biological Process

GO:0045214  sarcomere organization

Cellular Component

GO:0005856  cytoskeleton
GO:0048471  perinuclear region of cytoplasm
GO:0031143  pseudopodium
GO:0030018  Z disc

Molecular Function

GO:0008092  cytoskeletal protein binding
GO:0051371  muscle alpha-actinin binding
GO:0005515  protein binding
GO:0005080  protein kinase C binding
GO:0008270  zinc ion binding