nischarin

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Synonym

nischarin, NISCH, IRAS, FLJ40413, FLJ14425, FLJ90519, I-1, KIAA0975

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:215.70 cerebellum:541.50 brain stem:- corpus callosum/glia:87.50 pineal gland:148.30 peripheral nerve:92 spine:449.20 retina:118.60 eye:129.30 artery/aorta:60 vein:66.60 lymphnode:70.80 peripheral blood:36.40 spleen:132.30 thymus:244.80 bone marrow:157.40 adipose:121 bone:89.60 skin:57.60
GeneChip cerebrum:9.12 cerebellum:10.13 brain stem:8.86 corpus callosum/glia:8.60 pineal gland:- peripheral nerve:9.06 spine:8.58 retina:- eye:- artery/aorta:9.07 vein:8.18 lymphnode:9.06 peripheral blood:- spleen:8.91 thymus:9 bone marrow:8.11 adipose:8.72 bone:- skin:8.82
CAGE cerebrum:4.13 cerebellum:- brain stem:3.57 corpus callosum/glia:3.80 pineal gland:4.14 peripheral nerve:- spine:3.43 retina:- eye:- artery/aorta:3.59 vein:3.37 lymphnode:3.11 peripheral blood:- spleen:2.69 thymus:3.36 bone marrow:- adipose:3.13 bone:- skin:-
RNA-seq cerebrum:4.29 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.50 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.28 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:218.70 placenta:65.60 prostate:123.90 ovary:298.10 testis:302.90 heart:63.90 muscle:20.10 esophagus:- stomach:361.10 intestine:129.60 colon:84.80     liver/hepato:10.60        lung:176    bladder:- kidney:62.40 pituitary:116 thyroid/parathyroid:- adrenal gland:- pancreas:53.30 breast:83.60 salivary:-
GeneChip uterus:9.06 placenta:8.26 prostate:9.40 ovary:8.83 testis:9.85 heart:8.23 muscle:7.86 esophagus:8.55 stomach:8.69 intestine:8.19 colon:8.16 liver/hepato:8.44 lung:9.01 bladder:- kidney:8.67 pituitary:10.35 thyroid/parathyroid:9.03 adrenal gland:9.36 pancreas:7.64 breast:9.08 salivary:8.69
CAGE uterus:3.79 placenta:3.18 prostate:3.78 ovary:3.54 testis:4.21 heart:3.17 muscle:2.83 esophagus:3.17 stomach:- intestine:2.75 colon:3.13     liver/hepato:2.25    lung:3.15 bladder:3.37 kidney:2.86 pituitary:4.77 thyroid/parathyroid:3.25 adrenal gland:- pancreas:2.76 breast:3.02 salivary:3.64
RNA-seq uterus:- placenta:- prostate:3.98 ovary:4.39 testis:4.71 heart:2.22 muscle:1.89 esophagus:- stomach:- intestine:- colon:2.72     liver/hepato:1.98        lung:3.16    bladder:- kidney:3.26 pituitary:- thyroid/parathyroid:3.85 adrenal gland:3.22 pancreas:- breast:3.37 salivary:-

Gene Information

IDs

Refseq ID NM_007184
Gene ID 11188
Unigene ID Hs.435290
Probe set ID 201591_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000010322
GTEx ID ENSG00000010322

Orthologous Gene

Mouse[1]  NM_022656
Rat[1]  NM_022656

Chromosomal Region

3p21.1  [52,489,134  -  52,527,087]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

9851558
10231032
10882231
11121431
11912194
12021582
12477932
12865160
12868002
14702039
15028619
15028621
15028622
15028623
15475348
16598778
18561481
19913121
19946888
20628086
20935629
21139048
21145461
21706016
21890473
21906983
21917605
21926972
21963094
22053931
22483786
23572524
23974872
24639526

Gene Ontology  (GO ID)

Biological Process

GO:0030036  actin cytoskeleton organization
GO:0006915  apoptosis
GO:0006006  glucose metabolic process
GO:0030336  negative regulation of cell migration
GO:0048243  norepinephrine secretion
GO:0016601  Rac protein signal transduction
GO:0008217  regulation of blood pressure
GO:0032228  regulation of synaptic transmission, GABAergic

Cellular Component

GO:0005829  cytosol
GO:0005769  early endosome
GO:0005886  plasma membrane
GO:0055037  recycling endosome

Molecular Function

GO:0008227  G-protein coupled amine receptor activity
GO:0005178  integrin binding
GO:0035091  phosphoinositide binding