ATG4 autophagy related 4 homolog A (S. cerevisiae)

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Synonym

Cysteine protease ATG4A, Autophagy-related cysteine endopeptidase 2, Autophagy-related protein 4 homolog A, ATG4 autophagy related 4 homolog A (S. cerevisiae), Autophagin-2, APG4 autophagy 4 homolog A (S. cerevisiae), ATG4A, hAPG4A, AUT-like 2 cysteine endopeptidase, APG4A, AUTL2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:17.80 cerebellum:50.40 brain stem:- corpus callosum/glia:58.30 pineal gland:- peripheral nerve:- spine:- retina:- eye:23.50 artery/aorta:60 vein:66.60 lymphnode:20.20 peripheral blood:18.20 spleen:113.40 thymus:12.90 bone marrow:39.40 adipose:40.30 bone:12.80 skin:57.60
GeneChip cerebrum:6.07 cerebellum:6.17 brain stem:6.03 corpus callosum/glia:6.23 pineal gland:- peripheral nerve:6.63 spine:6.26 retina:- eye:- artery/aorta:6.48 vein:6.44 lymphnode:6.48 peripheral blood:- spleen:6.44 thymus:6.49 bone marrow:7.10 adipose:6.50 bone:- skin:6.31
CAGE cerebrum:1.71 cerebellum:- brain stem:1.97 corpus callosum/glia:1.77 pineal gland:2.46 peripheral nerve:- spine:1.78 retina:- eye:- artery/aorta:2.00 vein:1.98 lymphnode:2.13 peripheral blood:- spleen:2.29 thymus:2.25 bone marrow:- adipose:2.05 bone:- skin:-
RNA-seq cerebrum:1.50 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.64 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.56 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:32.80 prostate:33.80 ovary:- testis:30.30 heart:- muscle:20.10 esophagus:- stomach:- intestine:97.20 colon:25.40     liver/hepato:31.70        lung:58.70    bladder:125.60 kidney:31.20 pituitary:116 thyroid/parathyroid:- adrenal gland:- pancreas:35.60 breast:18.60 salivary:-
GeneChip uterus:6.17 placenta:6.28 prostate:6.28 ovary:6.01 testis:5.86 heart:6.52 muscle:7.03 esophagus:6.61 stomach:6.77 intestine:6.57 colon:6.29 liver/hepato:6.89 lung:6.60 bladder:- kidney:6.57 pituitary:6.61 thyroid/parathyroid:6.55 adrenal gland:6.41 pancreas:6.81 breast:6.39 salivary:6.81
CAGE uterus:1.80 placenta:1.96 prostate:1.96 ovary:1.65 testis:1.34 heart:2.12 muscle:2.13 esophagus:1.92 stomach:- intestine:2.79 colon:1.76     liver/hepato:2.87    lung:2.14 bladder:1.86 kidney:2.59 pituitary:2.58 thyroid/parathyroid:2.31 adrenal gland:- pancreas:2.90 breast:0.55 salivary:2.66
RNA-seq uterus:- placenta:- prostate:2.56 ovary:2.22 testis:2.32 heart:2.66 muscle:2.30 esophagus:- stomach:- intestine:- colon:2.57     liver/hepato:3.36        lung:3.44    bladder:- kidney:3.59 pituitary:- thyroid/parathyroid:3.33 adrenal gland:1.95 pancreas:- breast:2.51 salivary:-

Gene Information

IDs

Refseq ID NM_052936
Gene ID 115201
Unigene ID Hs.8763
Probe set ID 213115_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000101844
GTEx ID ENSG00000101844

Orthologous Gene

Mouse[1]  NM_174875
Rat[1]  NM_174875

Chromosomal Region

Xq22.3  [107,334,898  -  107,397,901]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12446702
12473658
12477932
14702039
15169837
15489334
15772651
17207965
17347651
20010802
20819778
21122541
21177865
21297227
23508006
24100292

Gene Ontology  (GO ID)

Biological Process

GO:0006914  autophagy
GO:0015031  protein transport
GO:0006508  proteolysis

Cellular Component

GO:0005737  cytoplasm

Molecular Function

GO:0008234  cysteine-type peptidase activity