collagen triple helix repeat containing 1

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Synonym

NMTC1 protein, collagen triple helix repeat containing 1, UNQ762/PRO1550, CTHRC1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:17.60 artery/aorta:60 vein:66.60 lymphnode:- peripheral blood:- spleen:18.90 thymus:- bone marrow:- adipose:- bone:25.60 skin:24
GeneChip nodata
CAGE cerebrum:0.35 cerebellum:- brain stem:0.80 corpus callosum/glia:0.24 pineal gland:0.48 peripheral nerve:- spine:0.30 retina:- eye:- artery/aorta:3.26 vein:1.89 lymphnode:1.61 peripheral blood:- spleen:0.56 thymus:0.86 bone marrow:- adipose:2.81 bone:- skin:-
RNA-seq cerebrum:0.15 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.06 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.28 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:54.60 prostate:- ovary:- testis:8.70 heart:38.30 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:21.10        lung:29.30    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:26.70 breast:27.90 salivary:-
GeneChip nodata
CAGE uterus:1.41 placenta:2.97 prostate:1.34 ovary:1.33 testis:1.22 heart:1.45 muscle:1.03 esophagus:1.26 stomach:- intestine:0.90 colon:1.33     liver/hepato:0    lung:1.10 bladder:2.39 kidney:0.82 pituitary:0.42 thyroid/parathyroid:0.98 adrenal gland:- pancreas:0.58 breast:3.27 salivary:2.93
RNA-seq uterus:- placenta:- prostate:3.53 ovary:0.83 testis:1.55 heart:0.66 muscle:0.69 esophagus:- stomach:- intestine:- colon:2.06     liver/hepato:0.00        lung:2.10    bladder:- kidney:0.67 pituitary:- thyroid/parathyroid:0.96 adrenal gland:2.36 pancreas:- breast:3.76 salivary:-

Gene Information

IDs

Refseq ID NM_138455
Gene ID 115908
Unigene ID Hs.405614
Probe set ID -
Ensembl ID ENSG00000164932
GTEx ID ENSG00000164932

Orthologous Gene

Mouse[1]  NM_026778
Rat[1]  NM_172333

Chromosomal Region

8q22.3  [104,383,743  -  104,395,225]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
12975309
15340161
15489334
15618538
16778098
18467647
19730683
21791690
22590977
23222813
23274062
23359115
23703614
24370779
24746208

Gene Ontology  (GO ID)

Biological Process

GO:0016477  cell migration
GO:0090103  cochlea morphogenesis
GO:0090177  establishment of planar polarity involved in neural tube closure
GO:0060122  inner ear receptor stereocilium organization
GO:0090090  negative regulation of Wnt receptor signaling pathway through beta-catenin
GO:0043932  ossification involved in bone remodeling
GO:0045669  positive regulation of osteoblast differentiation
GO:0033690  positive regulation of osteoblast proliferation
GO:0032092  positive regulation of protein binding
GO:0060071  Wnt receptor signaling pathway, planar cell polarity pathway

Cellular Component

GO:0005581  collagen
GO:0005737  cytoplasm
GO:0005615  extracellular space

Molecular Function

GO:0005109  frizzled binding
GO:0017147  Wnt-protein binding