chloride channel Ka

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Synonym

CLCK1, ClC-K1, hClC-Ka, MGC61490, Chloride channel Ka, Chloride channel protein ClC-Ka, chloride channel Ka, CLCNKA

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:8.30 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:4.35 cerebellum:5.05 brain stem:4.35 corpus callosum/glia:4.47 pineal gland:- peripheral nerve:4.46 spine:4.35 retina:- eye:- artery/aorta:4.49 vein:4.64 lymphnode:4.26 peripheral blood:- spleen:4.30 thymus:4.14 bone marrow:4.55 adipose:4.52 bone:- skin:4.59
CAGE cerebrum:0.29 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:2.11 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:0 lymphnode:0 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:0.55 bone:- skin:-
RNA-seq cerebrum:0.04 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.04 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.06 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:17.30 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:207.90 pituitary:- thyroid/parathyroid:327.50 adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4.21 placenta:4.85 prostate:4.18 ovary:4.32 testis:4.64 heart:4.47 muscle:4.57 esophagus:4.32 stomach:4.33 intestine:4.33 colon:4.40 liver/hepato:4.45 lung:4.43 bladder:- kidney:9.21 pituitary:5.19 thyroid/parathyroid:5.57 adrenal gland:4.48 pancreas:4.96 breast:4.52 salivary:6.42
CAGE uterus:0.23 placenta:0 prostate:0 ovary:0.14 testis:0 heart:0.03 muscle:0 esophagus:0 stomach:- intestine:0 colon:0.35     liver/hepato:0    lung:0 bladder:0 kidney:3.20 pituitary:1.13 thyroid/parathyroid:0.12 adrenal gland:- pancreas:0 breast:0 salivary:0.62
RNA-seq uterus:- placenta:- prostate:0.05 ovary:0.16 testis:0.78 heart:0.11 muscle:0.08 esophagus:- stomach:- intestine:- colon:0.03     liver/hepato:0        lung:0.14    bladder:- kidney:3.99 pituitary:- thyroid/parathyroid:0.97 adrenal gland:0.09 pancreas:- breast:0.11 salivary:-

Gene Information

IDs

Refseq ID NM_001042704
Gene ID 1187
Unigene ID Hs.591533
Probe set ID 207047_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000186510
GTEx ID ENSG00000186510

Orthologous Gene

Mouse[5]  NM_019701, NM_001146307, NM_024412
Rat[1]  NM_053327, NM_173103, NM_024412

Chromosomal Region

1p36.13  [16,345,330  -  16,360,545]

Gene Family (Interpro ID)

IPR002250  Chloride channel CLC-K
IPR001807  Chloride channel, voltage gated

Link to Pubmed  (Pubmed ID)

8041726
8125298
8544406
8812470
9046241
11734858
12477932
15044642
15489334
16849430
17081983
17510212
17562318
17652939
18094726
18648499
19913121
20628086
20805576
21248228
23850580

Gene Ontology  (GO ID)

Biological Process

GO:0007588  excretion
GO:0034220  ion transmembrane transport
GO:0055085  transmembrane transport
GO:0006810  transport

Cellular Component

GO:0034707  chloride channel complex
GO:0005887  integral to plasma membrane
GO:0005886  plasma membrane

Molecular Function

GO:0030554  adenyl nucleotide binding
GO:0005247  voltage-gated chloride channel activity