clathrin, light chain (Lca)

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Synonym

CLTA, clathrin, light chain (Lca), Clathrin light chain A, Lca

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:96 cerebellum:25.20 brain stem:- corpus callosum/glia:- pineal gland:296.70 peripheral nerve:92 spine:336.90 retina:474.60 eye:182.20 artery/aorta:60 vein:- lymphnode:182 peripheral blood:72.90 spleen:37.80 thymus:- bone marrow:19.70 adipose:80.70 bone:25.60 skin:48
GeneChip cerebrum:9.09 cerebellum:9.23 brain stem:9.33 corpus callosum/glia:8.90 pineal gland:- peripheral nerve:8.88 spine:9.11 retina:- eye:- artery/aorta:8.70 vein:8.74 lymphnode:8.62 peripheral blood:- spleen:8.48 thymus:8.86 bone marrow:8.45 adipose:8.80 bone:- skin:8.92
CAGE cerebrum:5.47 cerebellum:- brain stem:5.42 corpus callosum/glia:5.47 pineal gland:5.07 peripheral nerve:- spine:5.31 retina:- eye:- artery/aorta:5.33 vein:5.36 lymphnode:5.35 peripheral blood:- spleen:5.51 thymus:5.32 bone marrow:- adipose:5.49 bone:- skin:-
RNA-seq cerebrum:4.78 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:94.70 prostate:101.40 ovary:298.10 testis:82.20 heart:63.90 muscle:80.40 esophagus:- stomach:21.20 intestine:- colon:101.80     liver/hepato:10.60        lung:156.40    bladder:125.60 kidney:52 pituitary:232 thyroid/parathyroid:- adrenal gland:50.80 pancreas:142.30 breast:102.20 salivary:-
GeneChip uterus:9.22 placenta:9.10 prostate:9.28 ovary:9.67 testis:9.04 heart:8.08 muscle:7.10 esophagus:9.24 stomach:8.41 intestine:8.64 colon:9.11 liver/hepato:8.29 lung:8.87 bladder:- kidney:9.08 pituitary:8.57 thyroid/parathyroid:9.14 adrenal gland:8.73 pancreas:8.84 breast:8.93 salivary:8.70
CAGE uterus:5.48 placenta:5.70 prostate:5.45 ovary:5.60 testis:5.37 heart:5.08 muscle:4.86 esophagus:5.41 stomach:- intestine:5.45 colon:5.39     liver/hepato:5.36    lung:5.37 bladder:5.25 kidney:5.68 pituitary:5.25 thyroid/parathyroid:5.71 adrenal gland:- pancreas:5.25 breast:5.37 salivary:5.63
RNA-seq uterus:- placenta:- prostate:0.21 ovary:0.00 testis:0.09 heart:0.00 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0.00        lung:0.00    bladder:- kidney:0.24 pituitary:- thyroid/parathyroid:0.50 adrenal gland:0.00 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_001076677
Gene ID 1211
Unigene ID Hs.522114
Probe set ID 204050_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000122705
GTEx ID ENSG00000122705

Orthologous Gene

Mouse[6]  NM_001080384, NM_001080385, NM_001080386, NM_016760
Rat [0]  

Chromosomal Region

9p13.3  [36,190,853  -  36,304,778]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1975516
2204686
2211724
2406259
3267234
4066749
7713494
8125298
8413590
9314527
9651214
10567358
11031247
11157096
11252894
11889126
12057195
12426379
12477932
12589051
12692238
15164053
15489334
15533940
16138905
16799092
17110338
17140399
17213182
17581864
17620599
18165318
18548008
18602423
18854154
18977142
19144635
19615732
19738201
19913121
19946888
20012528
20562859
20628086
21139048
21145461
21152103
21203429
21289110
21611203
21704113
21738476
21890473
21900206
21988832
22505724
22623428
23000965
23304142
23398456
23460120
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0019886  antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0007411  axon guidance
GO:0006897  endocytosis
GO:0007173  epidermal growth factor receptor signaling pathway
GO:0006886  intracellular protein transport
GO:0016044  membrane organization
GO:0042059  negative regulation of epidermal growth factor receptor signaling pathway
GO:0048011  nerve growth factor receptor signaling pathway
GO:0006892  post-Golgi vesicle-mediated transport

Cellular Component

GO:0030118  clathrin coat
GO:0030132  clathrin coat of coated pit
GO:0030130  clathrin coat of trans-Golgi network vesicle
GO:0030669  clathrin-coated endocytic vesicle membrane
GO:0016023  cytoplasmic membrane-bounded vesicle
GO:0005829  cytosol
GO:0005886  plasma membrane
GO:0032588  trans-Golgi network membrane

Molecular Function

GO:0003674  molecular_function
GO:0042277  peptide binding
GO:0005198  structural molecule activity