zinc finger CCCH-type containing 18

 jump to detail

Synonym

FLJ34530, FLJ22664, conserved nuclear protein NHN1, NHN1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:62.80 cerebellum:100.80 brain stem:- corpus callosum/glia:58.30 pineal gland:- peripheral nerve:30.70 spine:- retina:118.60 eye:41.10 artery/aorta:30 vein:- lymphnode:50.60 peripheral blood:- spleen:37.80 thymus:116 bone marrow:78.70 adipose:40.30 bone:64 skin:14.40
GeneChip nodata
CAGE cerebrum:3.20 cerebellum:- brain stem:3.08 corpus callosum/glia:3.42 pineal gland:3.08 peripheral nerve:- spine:3.18 retina:- eye:- artery/aorta:3.03 vein:3.48 lymphnode:3.28 peripheral blood:- spleen:3.21 thymus:3.47 bone marrow:- adipose:3.10 bone:- skin:-
RNA-seq cerebrum:2.53 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.14 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.15 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:32.80 prostate:33.80 ovary:74.50 testis:64.90 heart:12.80 muscle:- esophagus:- stomach:- intestine:97.20 colon:67.80     liver/hepato:21.10        lung:88    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:35.60 breast:18.60 salivary:-
GeneChip nodata
CAGE uterus:3.31 placenta:3.21 prostate:3.01 ovary:3.08 testis:3.51 heart:3.06 muscle:3.23 esophagus:2.83 stomach:- intestine:3.09 colon:3.29     liver/hepato:2.79    lung:2.88 bladder:2.97 kidney:2.77 pituitary:3.06 thyroid/parathyroid:2.92 adrenal gland:- pancreas:3.26 breast:3.16 salivary:3.08
RNA-seq uterus:- placenta:- prostate:3.11 ovary:3.49 testis:3.88 heart:2.01 muscle:3.10 esophagus:- stomach:- intestine:- colon:2.99     liver/hepato:2.04        lung:2.73    bladder:- kidney:2.67 pituitary:- thyroid/parathyroid:3.23 adrenal gland:2.94 pancreas:- breast:2.71 salivary:-

Gene Information

IDs

Refseq ID NM_144604
Gene ID 124245
Unigene ID Hs.93670
Probe set ID -
Ensembl ID ENSG00000158545
GTEx ID ENSG00000158545

Orthologous Gene

Mouse[2]  NM_001029993, NM_001029994
Rat[2]  NM_001029993, NM_001029994

Chromosomal Region

16q24.2  [88,636,789  -  88,698,374]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8125298
12477932
14702039
15146197
15302935
16344560
17332742
17579712
18029348
19596686
19615732
20379614
21044950
21139048
21145461
21549307
22586326
22939629
23455922
24250222
24639526
24816145

Gene Ontology  (GO ID)

Cellular Component

GO:0005730  nucleolus
GO:0005634  nucleus

Molecular Function

GO:0046872  metal ion binding