spermatogenesis associated 17

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Synonym

RP11-144C20.1, spermatogenesis associated 17, IQCH, SPATA17

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:7.10 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:5.90 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:4.80
GeneChip nodata
CAGE cerebrum:1.12 cerebellum:- brain stem:1.07 corpus callosum/glia:1.86 pineal gland:1.04 peripheral nerve:- spine:1.00 retina:- eye:- artery/aorta:1.38 vein:0.34 lymphnode:0.37 peripheral blood:- spleen:0.09 thymus:0.28 bone marrow:- adipose:0.36 bone:- skin:-
RNA-seq cerebrum:0.63 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.05 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:11.30 ovary:- testis:99.50 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:9.80    bladder:- kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:18.60 salivary:-
GeneChip nodata
CAGE uterus:1.04 placenta:0.54 prostate:1.09 ovary:2.01 testis:4.64 heart:1.21 muscle:0.09 esophagus:0.40 stomach:- intestine:0.38 colon:0.36     liver/hepato:0.46    lung:2.11 bladder:0.40 kidney:1.84 pituitary:3.07 thyroid/parathyroid:1.88 adrenal gland:- pancreas:0.94 breast:0 salivary:1.00
RNA-seq uterus:- placenta:- prostate:0.36 ovary:2.19 testis:6.25 heart:0.29 muscle:0.28 esophagus:- stomach:- intestine:- colon:0.37     liver/hepato:0.07        lung:2.06    bladder:- kidney:1.56 pituitary:- thyroid/parathyroid:1.25 adrenal gland:0.05 pancreas:- breast:0.55 salivary:-

Gene Information

IDs

Refseq ID NM_138796
Gene ID 128153
Unigene ID Hs.171130
Probe set ID -
Ensembl ID ENSG00000162814
GTEx ID ENSG00000162814

Orthologous Gene

Mouse[2]  NM_028848, NM_029067
Rat[2]  NM_028848, NM_029067

Chromosomal Region

1q41  [217,804,666  -  218,045,038]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
14702039
15489334
16395525
16710414
17081983
19483714
19680270
23079716

Gene Ontology  (GO ID)

Cellular Component

GO:0005737  cytoplasm

Molecular Function

GO:0005516  calmodulin binding