lin-54 homolog (C. elegans)

 jump to detail

Synonym

DKFZp686L1814, MGC129905

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:10.70 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:5.90 artery/aorta:- vein:- lymphnode:20.20 peripheral blood:18.20 spleen:- thymus:12.90 bone marrow:39.40 adipose:- bone:- skin:19.20
GeneChip nodata
CAGE cerebrum:2.83 cerebellum:- brain stem:3.06 corpus callosum/glia:3.06 pineal gland:2.66 peripheral nerve:- spine:3.15 retina:- eye:- artery/aorta:2.12 vein:2.51 lymphnode:2.60 peripheral blood:- spleen:2.62 thymus:3.55 bone marrow:- adipose:2.47 bone:- skin:-
RNA-seq cerebrum:0.00 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.28 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:27.30 placenta:7.30 prostate:- ovary:- testis:21.60 heart:- muscle:- esophagus:- stomach:- intestine:- colon:17     liver/hepato:21.10        lung:24.40    bladder:- kidney:31.20 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:53.30 breast:18.60 salivary:-
GeneChip nodata
CAGE uterus:2.47 placenta:2.54 prostate:2.25 ovary:2.40 testis:2.44 heart:2.23 muscle:1.74 esophagus:2.68 stomach:- intestine:2.32 colon:2.20     liver/hepato:2.24    lung:2.39 bladder:2.54 kidney:2.85 pituitary:2.44 thyroid/parathyroid:2.52 adrenal gland:- pancreas:1.98 breast:2.02 salivary:2.35
RNA-seq uterus:- placenta:- prostate:0.00 ovary:0.28 testis:0.00 heart:0.07 muscle:0.32 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0.42        lung:0.00    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:0.93 adrenal gland:0.00 pancreas:- breast:0.07 salivary:-

Gene Information

IDs

Refseq ID NM_001115008
Gene ID 132660
Unigene ID Hs.96952
Probe set ID -
Ensembl ID ENSG00000189308
GTEx ID ENSG00000189308

Orthologous Gene

Mouse[2]  NM_001115010, NM_172714
Rat[1]  NM_001100564, NM_172714

Chromosomal Region

4q21.22  [83,831,126  -  83,934,079]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
15479636
17531812
17671431
19322201
19471022
19725879
20360068
20379614
21498570
21693764
21963094
22895175

Gene Ontology  (GO ID)

Biological Process

GO:0000278  mitotic cell cycle
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005654  nucleoplasm

Molecular Function

GO:0003677  DNA binding