spermatogenesis associated 18 homolog (rat)

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Synonym

spermatogenesis associated 18 homolog (rat), SPATA18, FLJ32906

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:22.50 cerebellum:- brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:19.20
GeneChip nodata
CAGE cerebrum:0.75 cerebellum:- brain stem:0.66 corpus callosum/glia:1.83 pineal gland:1.26 peripheral nerve:- spine:0.71 retina:- eye:- artery/aorta:2.92 vein:1.03 lymphnode:1.05 peripheral blood:- spleen:0.66 thymus:0.96 bone marrow:- adipose:1.41 bone:- skin:-
RNA-seq cerebrum:0.74 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.49 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.57 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:- prostate:22.50 ovary:- testis:250.90 heart:12.80 muscle:- esophagus:- stomach:- intestine:- colon:8.50     liver/hepato:-        lung:102.60    bladder:- kidney:41.60 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:35.60 breast:18.60 salivary:-
GeneChip nodata
CAGE uterus:1.90 placenta:1.25 prostate:1.83 ovary:2.50 testis:4.54 heart:1.59 muscle:0.49 esophagus:2.08 stomach:- intestine:1.58 colon:1.52     liver/hepato:1.86    lung:3.06 bladder:1.47 kidney:1.80 pituitary:2.27 thyroid/parathyroid:1.09 adrenal gland:- pancreas:0.58 breast:1.36 salivary:3.05
RNA-seq uterus:- placenta:- prostate:1.74 ovary:3.29 testis:3.97 heart:0.69 muscle:0.72 esophagus:- stomach:- intestine:- colon:1.21     liver/hepato:0.64        lung:3.68    bladder:- kidney:1.70 pituitary:- thyroid/parathyroid:1.24 adrenal gland:0.63 pancreas:- breast:1.71 salivary:-

Gene Information

IDs

Refseq ID NM_145263
Gene ID 132671
Unigene ID Hs.527090
Probe set ID -
Ensembl ID ENSG00000163071
GTEx ID ENSG00000163071

Orthologous Gene

Mouse[1]  NM_178387
Rat[1]  NM_199374

Chromosomal Region

4q12  [52,917,497  -  52,963,458]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
14702039
15489334
16088906
21264221
21264228
21300779
22292033
22990118

Gene Ontology  (GO ID)

Biological Process

GO:0033554  cellular response to stress
GO:0006974  response to DNA damage stimulus

Cellular Component

GO:0005737  cytoplasm
GO:0043231  intracellular membrane-bounded organelle
GO:0005741  mitochondrial outer membrane

Molecular Function

GO:0005515  protein binding