tigger transposable element derived 2

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Synonym

TIGD2, tigger transposable element derived 2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:11.80 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:40.30 bone:- skin:-
GeneChip nodata
CAGE nodata
RNA-seq cerebrum:1.03 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.73 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.13 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:10.90 prostate:- ovary:- testis:4.30 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:10.60        lung:4.90    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:9.30 salivary:328.40
GeneChip nodata
CAGE nodata
RNA-seq uterus:- placenta:- prostate:1.88 ovary:1.79 testis:1.97 heart:0.60 muscle:1.09 esophagus:- stomach:- intestine:- colon:0.89     liver/hepato:3.22        lung:0.87    bladder:- kidney:2.03 pituitary:- thyroid/parathyroid:2.34 adrenal gland:1.72 pancreas:- breast:2.02 salivary:-

Gene Information

IDs

Refseq ID NM_145715
Gene ID 166815
Unigene ID Hs.58924
Probe set ID -
Ensembl ID ENSG00000180346
GTEx ID ENSG00000180346

Orthologous Gene

Mouse[1]  NM_001081145
Rat[1]  NM_001081145

Chromosomal Region

4q22.1  [90,033,968  -  90,036,050]

Gene Family (Interpro ID)

IPR011526  Helix-turn-helix, Psq-like
IPR006600  Pogo transposase / Cenp-B / PDC2, DNA-binding HTH domain

Link to Pubmed  (Pubmed ID)

8643651
8889548
8917322
15342556
15815621
16712791

Gene Ontology  (GO ID)

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding