PDZ domain containing ring finger 3

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Synonym

Semaphorin cytoplasmic domain-associated protein 3, LNX3, PDZ domain-containing RING finger protein 3, SEMACAP3, PDZ domain containing RING finger 3, SEMCAP3, KIAA1095, PDZRN3, Ligand of Numb-protein X 3, SEMACAP3 protein

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:5.27 cerebellum:3.52 brain stem:4.32 corpus callosum/glia:4.53 pineal gland:- peripheral nerve:6.60 spine:5.94 retina:- eye:- artery/aorta:7.31 vein:7.44 lymphnode:4.74 peripheral blood:- spleen:3.84 thymus:3.69 bone marrow:3.28 adipose:6.83 bone:- skin:6.43
CAGE cerebrum:2.41 cerebellum:- brain stem:1.73 corpus callosum/glia:2.11 pineal gland:0.99 peripheral nerve:- spine:1.88 retina:- eye:- artery/aorta:3.87 vein:1.57 lymphnode:1.28 peripheral blood:- spleen:0.25 thymus:0.50 bone marrow:- adipose:2.34 bone:- skin:-
RNA-seq cerebrum:2.53 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.77 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.75 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:8.63 placenta:5.61 prostate:7.93 ovary:7.46 testis:5.38 heart:7.21 muscle:7.41 esophagus:6.60 stomach:7.41 intestine:6.79 colon:7.05 liver/hepato:3.23 lung:6.34 bladder:- kidney:5.85 pituitary:3.84 thyroid/parathyroid:4.01 adrenal gland:7.17 pancreas:4.39 breast:7.36 salivary:6.30
CAGE uterus:3.55 placenta:1.71 prostate:3.27 ovary:3.37 testis:1.70 heart:2.60 muscle:1.32 esophagus:2.59 stomach:- intestine:2.18 colon:3.13     liver/hepato:0.63    lung:1.96 bladder:3.11 kidney:1.55 pituitary:1.09 thyroid/parathyroid:0.82 adrenal gland:- pancreas:0.58 breast:2.74 salivary:2.06
RNA-seq uterus:- placenta:- prostate:4.74 ovary:5.00 testis:3.80 heart:4.24 muscle:2.90 esophagus:- stomach:- intestine:- colon:4.65     liver/hepato:0.26        lung:2.46    bladder:- kidney:2.24 pituitary:- thyroid/parathyroid:2.43 adrenal gland:2.98 pancreas:- breast:3.92 salivary:-

Gene Information

IDs

Refseq ID NM_015009
Gene ID 23024
Unigene ID -
Probe set ID 212915_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000121440
GTEx ID ENSG00000121440

Orthologous Gene

Mouse[1]  NM_018884
Rat[1]  NM_018884

Chromosomal Region

3p13  [73,431,584  -  73,674,091]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10431247
10470851
12477932
14702039
15010864
15188402
15305371
15458844
15489334
17118964
17576800
20306291
20379614
20668165
21546767
22609016
22889411
23166209

Gene Ontology  (GO ID)

Biological Process

GO:0007528  neuromuscular junction development
GO:0016567  protein ubiquitination

Cellular Component

GO:0031594  neuromuscular junction

Molecular Function

GO:0004842  ubiquitin-protein ligase activity
GO:0008270  zinc ion binding