synaptotagmin XI

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Synonym

MGC17226, DKFZp781D015, KIAA0080, Synaptotagmin XI, MGC10881, Synaptotagmin-11, SYT11, SYT12, synaptotagmin XI, SytXI

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:564.10 cerebellum:478.60 brain stem:- corpus callosum/glia:349.90 pineal gland:296.70 peripheral nerve:214.70 spine:- retina:593.20 eye:111.70 artery/aorta:89.90 vein:- lymphnode:50.60 peripheral blood:18.20 spleen:- thymus:12.90 bone marrow:- adipose:- bone:12.80 skin:57.60
GeneChip cerebrum:9.31 cerebellum:8.72 brain stem:9.21 corpus callosum/glia:9.01 pineal gland:- peripheral nerve:9.24 spine:9.21 retina:- eye:- artery/aorta:6.76 vein:5.58 lymphnode:5.22 peripheral blood:- spleen:5.60 thymus:4.37 bone marrow:4.28 adipose:4.73 bone:- skin:4.55
CAGE cerebrum:6.44 cerebellum:- brain stem:6.46 corpus callosum/glia:6.61 pineal gland:5.36 peripheral nerve:- spine:6.47 retina:- eye:- artery/aorta:4.89 vein:3.29 lymphnode:3.06 peripheral blood:- spleen:3.08 thymus:2.23 bone marrow:- adipose:3.36 bone:- skin:-
RNA-seq cerebrum:7.49 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.20 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.58 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:54.70 placenta:3.60 prostate:33.80 ovary:- testis:30.30 heart:63.90 muscle:- esophagus:342.80 stomach:- intestine:- colon:-     liver/hepato:21.10        lung:24.40    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:35.60 breast:55.80 salivary:-
GeneChip uterus:5.78 placenta:4.38 prostate:5.25 ovary:5.20 testis:5.18 heart:5.45 muscle:4.32 esophagus:4.69 stomach:5.21 intestine:4.75 colon:4.94 liver/hepato:4.29 lung:4.80 bladder:- kidney:4.54 pituitary:7.92 thyroid/parathyroid:4.63 adrenal gland:4.91 pancreas:4.74 breast:4.93 salivary:4.23
CAGE uterus:3.96 placenta:3.06 prostate:3.62 ovary:3.90 testis:3.60 heart:3.66 muscle:2.25 esophagus:3.14 stomach:- intestine:2.47 colon:3.02     liver/hepato:1.60    lung:3.07 bladder:3.82 kidney:2.89 pituitary:5.30 thyroid/parathyroid:2.39 adrenal gland:- pancreas:1.74 breast:3.52 salivary:1.89
RNA-seq uterus:- placenta:- prostate:3.65 ovary:3.82 testis:3.04 heart:2.44 muscle:1.36 esophagus:- stomach:- intestine:- colon:3.72     liver/hepato:0.55        lung:2.68    bladder:- kidney:2.26 pituitary:- thyroid/parathyroid:1.83 adrenal gland:2.71 pancreas:- breast:2.26 salivary:-

Gene Information

IDs

Refseq ID NM_152280
Gene ID 23208
Unigene ID Hs.32984
Probe set ID 209197_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000132718
GTEx ID ENSG00000132718

Orthologous Gene

Mouse[3]  NM_018804
Rat [0]  

Chromosomal Region

1q22  [155,829,300  -  155,854,990]

Gene Family (Interpro ID)

IPR000008  C2 calcium-dependent membrane targeting
IPR008973  C2 calcium/lipid-binding domain, CaLB
IPR018029  C2 membrane targeting protein

Link to Pubmed  (Pubmed ID)

7584044
10734137
11543631
12477932
12925569
14702039
15354386
15489334
16189514
16303743
16344560
17192956
19060904
19156168
21139048
21292315
22645275
23000965

Gene Ontology  (GO ID)

Cellular Component

GO:0030054  cell junction
GO:0005887  integral to plasma membrane
GO:0030672  synaptic vesicle membrane

Molecular Function

GO:0046872  metal ion binding
GO:0005515  protein binding
GO:0005215  transporter activity