astrotactin 2

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Synonym

ASTN2, astrotactin 2, bA67K19.1, KIAA0634

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:6.75 cerebellum:7.34 brain stem:6.84 corpus callosum/glia:6.80 pineal gland:- peripheral nerve:7.84 spine:6.68 retina:- eye:- artery/aorta:5.69 vein:5.10 lymphnode:5.11 peripheral blood:- spleen:5.05 thymus:5.80 bone marrow:5.14 adipose:5.03 bone:- skin:5.21
CAGE cerebrum:3.72 cerebellum:- brain stem:3.71 corpus callosum/glia:4.01 pineal gland:4.22 peripheral nerve:- spine:3.63 retina:- eye:- artery/aorta:2.58 vein:2.37 lymphnode:1.46 peripheral blood:- spleen:1.32 thymus:1.83 bone marrow:- adipose:1.66 bone:- skin:-
RNA-seq cerebrum:2.30 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.18 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.15 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:11.30 ovary:- testis:- heart:12.80 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:5.41 placenta:4.80 prostate:7.79 ovary:5.56 testis:7.25 heart:5.56 muscle:5.37 esophagus:4.88 stomach:5.59 intestine:5.34 colon:5.65 liver/hepato:5.07 lung:4.87 bladder:- kidney:5.66 pituitary:6.11 thyroid/parathyroid:4.97 adrenal gland:5.35 pancreas:5.96 breast:5.54 salivary:6.09
CAGE uterus:2.39 placenta:0.88 prostate:3.57 ovary:1.85 testis:3.70 heart:1.82 muscle:2.31 esophagus:1.60 stomach:- intestine:1.77 colon:2.24     liver/hepato:0.90    lung:1.45 bladder:2.16 kidney:1.38 pituitary:2.41 thyroid/parathyroid:1.28 adrenal gland:- pancreas:2.76 breast:2.27 salivary:2.80
RNA-seq uterus:- placenta:- prostate:0.96 ovary:0.64 testis:2.41 heart:0.16 muscle:0.79 esophagus:- stomach:- intestine:- colon:0.99     liver/hepato:0.07        lung:0.70    bladder:- kidney:0.28 pituitary:- thyroid/parathyroid:0.70 adrenal gland:0.21 pancreas:- breast:0.65 salivary:-

Gene Information

IDs

Refseq ID NM_198186
Gene ID 23245
Unigene ID Hs.601562
Probe set ID 215407_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000148219
GTEx ID ENSG00000148219

Orthologous Gene

Mouse[2]  NM_019514, NM_207109
Rat[2]  NM_019514, NM_207109

Chromosomal Region

9q33.1  [119,187,504  -  120,177,348]

Gene Family (Interpro ID)

IPR020864  Membrane attack complex component/perforin (MACPF) domain

Link to Pubmed  (Pubmed ID)

9734811
12477932
14702039
16344560
18839057
18940311
19086053
19910543
20195266
20379614
20889312
22504421
22566634
22658931
22683712
23251661
23284291
23793025
24250222

Gene Ontology  (GO ID)

Cellular Component

GO:0060187  cell pole
GO:0005768  endosome
GO:0016021  integral to membrane