ATP-binding cassette, sub-family A (ABC1), member 6

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Synonym

FLJ43498, ATP-binding cassette sub-family A member 6, ABCA6, EST155051

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:3.46 cerebellum:3.28 brain stem:3.60 corpus callosum/glia:4.15 pineal gland:- peripheral nerve:5.44 spine:4.13 retina:- eye:- artery/aorta:4.62 vein:4.44 lymphnode:3.96 peripheral blood:- spleen:3.26 thymus:3.21 bone marrow:3.39 adipose:5.28 bone:- skin:4.44
CAGE cerebrum:1.67 cerebellum:- brain stem:2.46 corpus callosum/glia:2.50 pineal gland:2.85 peripheral nerve:- spine:3.97 retina:- eye:- artery/aorta:2.51 vein:2.37 lymphnode:1.52 peripheral blood:- spleen:1.79 thymus:0.80 bone marrow:- adipose:4.25 bone:- skin:-
RNA-seq cerebrum:1.88 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.44 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.28 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:3.93 placenta:3.20 prostate:3.29 ovary:4.71 testis:3.11 heart:5.25 muscle:3.84 esophagus:3.99 stomach:4.14 intestine:3.80 colon:3.84 liver/hepato:7.19 lung:4.97 bladder:- kidney:3.27 pituitary:3.50 thyroid/parathyroid:4.32 adrenal gland:4.82 pancreas:3.35 breast:4.68 salivary:3.69
CAGE uterus:3.21 placenta:0.59 prostate:2.99 ovary:3.53 testis:1.70 heart:3.34 muscle:2.63 esophagus:3.21 stomach:- intestine:2.14 colon:2.12     liver/hepato:4.15    lung:3.14 bladder:3.29 kidney:1.44 pituitary:2.84 thyroid/parathyroid:2.44 adrenal gland:- pancreas:1.21 breast:3.16 salivary:2.17
RNA-seq uterus:- placenta:- prostate:3.19 ovary:2.70 testis:1.49 heart:2.69 muscle:1.36 esophagus:- stomach:- intestine:- colon:3.67     liver/hepato:4.15        lung:2.66    bladder:- kidney:1.23 pituitary:- thyroid/parathyroid:1.51 adrenal gland:0.87 pancreas:- breast:2.47 salivary:-

Gene Information

IDs

Refseq ID NM_080284
Gene ID 23460
Unigene ID -
Probe set ID 217504_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000154262
GTEx ID ENSG00000154262

Orthologous Gene

Mouse[3]  NM_001166556, NM_001166557, NM_147218
Rat[3]  NM_001166556, NM_001166557, NM_147218

Chromosomal Region

17q24.3  [67,074,847  -  67,138,015]

Gene Family (Interpro ID)

IPR003439  ABC transporter-like
IPR003593  ATPase, AAA+ type, core

Link to Pubmed  (Pubmed ID)

8894702
10639163
11435397
11478798
12477932
14702039
15174051
15489334
18676680
19170196
19343046
19625176
19692168
20379614

Gene Ontology  (GO ID)

Biological Process

GO:0006810  transport

Cellular Component

GO:0016021  integral to membrane

Molecular Function

GO:0005524  ATP binding
GO:0016887  ATPase activity