opsin 3

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Synonym

OPN3, Encephalopsin, opsin 3 (encephalopsin, panopsin), Panopsin, Opsin-3, ECPN, NMO-1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:6.51 cerebellum:4.82 brain stem:5.76 corpus callosum/glia:5.37 pineal gland:- peripheral nerve:6.21 spine:5.33 retina:- eye:- artery/aorta:5.34 vein:4.94 lymphnode:6.61 peripheral blood:- spleen:6.84 thymus:6.29 bone marrow:5.98 adipose:5.74 bone:- skin:5.82
CAGE cerebrum:2.94 cerebellum:- brain stem:2.31 corpus callosum/glia:2.25 pineal gland:1.66 peripheral nerve:- spine:2.10 retina:- eye:- artery/aorta:2.51 vein:2.70 lymphnode:2.96 peripheral blood:- spleen:3.16 thymus:3.44 bone marrow:- adipose:2.89 bone:- skin:-
RNA-seq cerebrum:3.29 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.53 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.09 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:5.95 placenta:9 prostate:5.13 ovary:6.34 testis:6.26 heart:5.64 muscle:5.27 esophagus:6.09 stomach:5.39 intestine:5.77 colon:6.33 liver/hepato:7.15 lung:7.95 bladder:- kidney:6.45 pituitary:5.99 thyroid/parathyroid:6.71 adrenal gland:5.74 pancreas:5.13 breast:6.47 salivary:5.50
CAGE uterus:2.19 placenta:4.23 prostate:2.28 ovary:3.08 testis:2.99 heart:2.32 muscle:0.99 esophagus:2.66 stomach:- intestine:2.31 colon:2.83     liver/hepato:3.77    lung:3.52 bladder:2.43 kidney:2.79 pituitary:3.37 thyroid/parathyroid:3.26 adrenal gland:- pancreas:1.98 breast:3.06 salivary:1.58
RNA-seq uterus:- placenta:- prostate:2.08 ovary:2.88 testis:2.65 heart:1.72 muscle:0.45 esophagus:- stomach:- intestine:- colon:2.28     liver/hepato:2.95        lung:3.38    bladder:- kidney:3.16 pituitary:- thyroid/parathyroid:2.69 adrenal gland:2.16 pancreas:- breast:2.24 salivary:-

Gene Information

IDs

Refseq ID NM_014322
Gene ID 23596
Unigene ID -
Probe set ID 219032_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000054277
GTEx ID ENSG00000054277

Orthologous Gene

Mouse[1]  NM_010098
Rat [0]  

Chromosomal Region

1q43  [241,753,404  -  241,840,678]

Gene Family (Interpro ID)

IPR000276  7TM GPCR, rhodopsin-like
IPR017452  GPCR, rhodopsin-like superfamily

Link to Pubmed  (Pubmed ID)

8889548
10234000
11401433
12063405
12242008
12477932
14623461
15489334
16710414
18240029
18344558
19626040
22313545

Gene Ontology  (GO ID)

Biological Process

GO:0009583  detection of light stimulus
GO:0009584  detection of visible light
GO:0007186  G-protein coupled receptor protein signaling pathway
GO:0007602  phototransduction
GO:0018298  protein-chromophore linkage
GO:0042752  regulation of circadian rhythm

Cellular Component

GO:0016021  integral to membrane
GO:0005887  integral to plasma membrane

Molecular Function

GO:0008020  G-protein coupled photoreceptor activity
GO:0004930  G-protein coupled receptor activity
GO:0009881  photoreceptor activity