leucine rich repeat containing 6

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Synonym

leucine rich repeat containing 6, Testis-specific leucine-rich repeat protein, TSLRP, Leucine-rich testis-specific protein, Leucine-rich repeat-containing protein 6, LRRC6, LRTP

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:55.70 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:66.60 lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:4.80
GeneChip cerebrum:5.21 cerebellum:4.86 brain stem:5.07 corpus callosum/glia:5.35 pineal gland:- peripheral nerve:5.24 spine:5.09 retina:- eye:- artery/aorta:5.01 vein:4.78 lymphnode:4.78 peripheral blood:- spleen:4.89 thymus:4.95 bone marrow:5.04 adipose:5 bone:- skin:5.12
CAGE cerebrum:2.29 cerebellum:- brain stem:1.90 corpus callosum/glia:2.02 pineal gland:2.29 peripheral nerve:- spine:2.06 retina:- eye:- artery/aorta:1.52 vein:1.10 lymphnode:0.79 peripheral blood:- spleen:0.88 thymus:0.68 bone marrow:- adipose:1.25 bone:- skin:-
RNA-seq cerebrum:1.74 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.59 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.64 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:- prostate:11.30 ovary:- testis:51.90 heart:12.80 muscle:- esophagus:- stomach:- intestine:- colon:17     liver/hepato:-        lung:34.20    bladder:- kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:50.80 pancreas:- breast:55.80 salivary:-
GeneChip uterus:5.28 placenta:5.09 prostate:4.88 ovary:5.81 testis:7.42 heart:5.07 muscle:4.75 esophagus:4.80 stomach:4.84 intestine:4.93 colon:4.70 liver/hepato:4.84 lung:5.12 bladder:- kidney:5.57 pituitary:5.54 thyroid/parathyroid:5.57 adrenal gland:5.19 pancreas:5.39 breast:5.20 salivary:4.91
CAGE uterus:1.61 placenta:0.64 prostate:1.34 ovary:2.06 testis:3.21 heart:0.79 muscle:0.25 esophagus:1.20 stomach:- intestine:1.13 colon:0.97     liver/hepato:0.63    lung:1.98 bladder:1.35 kidney:2.77 pituitary:2.51 thyroid/parathyroid:2.28 adrenal gland:- pancreas:0.58 breast:1.53 salivary:1.28
RNA-seq uterus:- placenta:- prostate:0.97 ovary:2.50 testis:4.54 heart:0.34 muscle:0 esophagus:- stomach:- intestine:- colon:0.36     liver/hepato:0.54        lung:2.39    bladder:- kidney:2.52 pituitary:- thyroid/parathyroid:1.76 adrenal gland:0.52 pancreas:- breast:1.18 salivary:-

Gene Information

IDs

Refseq ID NM_012472
Gene ID 23639
Unigene ID Hs.591865
Probe set ID 206483_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000129295
GTEx ID ENSG00000129295

Orthologous Gene

Mouse[1]  NM_019457
Rat[1]  NM_001025659

Chromosomal Region

8q24.22  [133,584,320  -  133,687,838]

Gene Family (Interpro ID)

IPR007052  CS domain
IPR008978  HSP20-like chaperone

Link to Pubmed  (Pubmed ID)

10775177
11329013
12477932
15489334
15831481
19395640
20215474
20301301
23122586
23122589
23527195
23891469

Gene Ontology  (GO ID)

Biological Process

GO:0003341  cilium movement
GO:0060287  cilium movement involved in determination of left/right asymmetry
GO:0000240  diplotene
GO:0008584  male gonad development
GO:0000239  pachytene
GO:0030317  sperm motility

Cellular Component

GO:0005929  cilium
GO:0005737  cytoplasm

Molecular Function

GO:0003674  molecular_function