collagen, type XXIX, alpha 1

 jump to detail

Synonym

FLJ35880

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:0 lymphnode:0 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.01 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.05 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:13 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:9.80    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE uterus:0 placenta:0 prostate:0 ovary:0 testis:0 heart:0 muscle:0 esophagus:0.09 stomach:- intestine:0.07 colon:0     liver/hepato:0    lung:0.05 bladder:0 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.03 ovary:0.04 testis:0.20 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0.02     liver/hepato:0        lung:0.00    bladder:- kidney:0.10 pituitary:- thyroid/parathyroid:0.01 adrenal gland:0.03 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_153264
Gene ID 256076
Unigene ID Hs.205403
Probe set ID -
Ensembl ID ENSG00000172752
GTEx ID ENSG00000172752

Orthologous Gene

Mouse [0]  
Rat [0]  

Chromosomal Region

3q22.1  [130,064,359  -  130,203,688]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

14702039
17850181
18276594
18400749
18839421
19478074
19961619
20379614
20649719
20882040
21353297
22118674
22226732

Gene Ontology  (GO ID)

Biological Process

GO:0007155  cell adhesion
GO:0030574  collagen catabolic process
GO:0022617  extracellular matrix disassembly
GO:0030198  extracellular matrix organization

Cellular Component

GO:0005581  collagen
GO:0031012  extracellular matrix
GO:0005576  extracellular region