pancreas specific transcription factor, 1a

 jump to detail

Synonym

Pancreas-specific transcription factor 1a, PTF1A, pancreas specific transcription factor, 1a, Pancreas transcription factor 1 subunit alpha, PTF1P48, bHLH transcription factor p48, PTF1-p48

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE cerebrum:0.01 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:0 lymphnode:0.12 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.10 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.04 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:35.60 breast:- salivary:-
GeneChip nodata
CAGE uterus:0 placenta:0 prostate:0 ovary:0 testis:0.84 heart:0.03 muscle:0 esophagus:0 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0 bladder:0 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:5.74 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0 ovary:0 testis:0.58 heart:0.01 muscle:0 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0        lung:0.01    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0 adrenal gland:0.05 pancreas:- breast:0.04 salivary:-

Gene Information

IDs

Refseq ID NM_178161
Gene ID 256297
Unigene ID Hs.351503
Probe set ID -
Ensembl ID ENSG00000168267
GTEx ID ENSG00000168267

Orthologous Gene

Mouse[1]  NM_018809
Rat [0]  

Chromosomal Region

10p12.2  [23,481,256  -  23,483,181]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1720355
2612907
8703005
8861960
9851981
10768861
12185368
12617822
15164054
15543146
16354684
17928434
18834332
19650412
19741120
20668890
23339455
24212882

Gene Ontology  (GO ID)

Biological Process

GO:0009790  embryonic development
GO:0031018  endocrine pancreas development
GO:0031017  exocrine pancreas development
GO:0030902  hindbrain development
GO:0048663  neuron fate commitment
GO:0006355  regulation of transcription, DNA-dependent
GO:0060042  retina morphogenesis in camera-type eye
GO:0048384  retinoic acid receptor signaling pathway
GO:0009888  tissue development

Cellular Component

GO:0005737  cytoplasm
GO:0005634  nucleus
GO:0005667  transcription factor complex

Molecular Function

GO:0003677  DNA binding
GO:0046983  protein dimerization activity
GO:0043565  sequence-specific DNA binding