Nipped-B homolog (Drosophila)

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Synonym

NIPBL, FLJ44854, Delangin, DKFZp434L1319, FLJ11203, IDN3-B, CDLS, FLJ13354, FLJ12597, IDN3, FLJ13648, SCC2 homolog, Nipped-B-like protein, Nipped-B homolog (Drosophila)

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:39.10 cerebellum:50.40 brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:122.70 spine:112.30 retina:- eye:47 artery/aorta:30 vein:- lymphnode:60.70 peripheral blood:72.90 spleen:- thymus:51.50 bone marrow:59 adipose:- bone:38.40 skin:72
GeneChip cerebrum:6.95 cerebellum:7.09 brain stem:6.88 corpus callosum/glia:7.37 pineal gland:- peripheral nerve:7.16 spine:7.05 retina:- eye:- artery/aorta:7.25 vein:7.07 lymphnode:7.48 peripheral blood:- spleen:7.62 thymus:8.40 bone marrow:7.45 adipose:7.16 bone:- skin:7.38
CAGE cerebrum:3.28 cerebellum:- brain stem:3.66 corpus callosum/glia:3.40 pineal gland:3.56 peripheral nerve:- spine:3.36 retina:- eye:- artery/aorta:2.86 vein:3.87 lymphnode:3.37 peripheral blood:- spleen:3.84 thymus:4.49 bone marrow:- adipose:3.71 bone:- skin:-
RNA-seq cerebrum:1.31 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.63 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.44 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:72.90 placenta:80.10 prostate:101.40 ovary:74.50 testis:47.60 heart:63.90 muscle:- esophagus:- stomach:42.50 intestine:32.40 colon:25.40     liver/hepato:137.20        lung:44    bladder:- kidney:104 pituitary:- thyroid/parathyroid:- adrenal gland:152.40 pancreas:106.70 breast:120.80 salivary:-
GeneChip uterus:7.70 placenta:7.56 prostate:7.58 ovary:7.80 testis:7.36 heart:6.97 muscle:7.05 esophagus:7.23 stomach:7.17 intestine:7.09 colon:6.81 liver/hepato:7 lung:7.47 bladder:- kidney:6.70 pituitary:7.27 thyroid/parathyroid:7.44 adrenal gland:7.14 pancreas:7.07 breast:7.38 salivary:6.72
CAGE uterus:3.67 placenta:3.71 prostate:3.71 ovary:3.63 testis:3.43 heart:3.39 muscle:3.42 esophagus:3.39 stomach:- intestine:3.81 colon:3.40     liver/hepato:3.27    lung:3.70 bladder:3.71 kidney:3.37 pituitary:3.86 thyroid/parathyroid:3.48 adrenal gland:- pancreas:2.71 breast:2.87 salivary:3.19
RNA-seq uterus:- placenta:- prostate:2.30 ovary:3.04 testis:3.10 heart:1.88 muscle:2.52 esophagus:- stomach:- intestine:- colon:2.67     liver/hepato:0.12        lung:2.02    bladder:- kidney:1.59 pituitary:- thyroid/parathyroid:2.35 adrenal gland:1.10 pancreas:- breast:1.54 salivary:-

Gene Information

IDs

Refseq ID NM_133433
Gene ID 25836
Unigene ID Hs.481927
Probe set ID 212469_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000164190
GTEx ID ENSG00000164190

Orthologous Gene

Mouse[4]  NM_027707, NM_201232
Rat[4]  NM_027707, NM_201232

Chromosomal Region

5p13.2  [36,876,861  -  37,066,515]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1531830
8291537
12477932
14702039
15146185
15146186
15146197
15302935
15318302
15489334
15591270
15635413
15882967
16100726
16169070
16236812
16565220
16682347
16802858
16964243
17081983
17106445
17264868
17468178
17577209
17661813
18299561
18854353
19052029
19056867
19242925
19468298
19471022
20124326
20301283
20301533
20358602
20360068
20431927
20562864
20634891
20720539
20727427
20824775
21139048
21211577
21784059
21934712
22094256
22174317
22241092
22353942
22586326
22857006
22939629
22965847
23251661
23254390
23505322
23760082
23912250
24136230
24145515
24189319
24332808
24457600

Gene Ontology  (GO ID)

Biological Process

GO:0007420  brain development
GO:0034613  cellular protein localization
GO:0071481  cellular response to X-ray
GO:0050890  cognition
GO:0000910  cytokinesis
GO:0048589  developmental growth
GO:0042471  ear morphogenesis
GO:0048557  embryonic digestive tract morphogenesis
GO:0035115  embryonic forelimb morphogenesis
GO:0048703  embryonic viscerocranium morphogenesis
GO:0035261  external genitalia morphogenesis
GO:0048592  eye morphogenesis
GO:0060325  face morphogenesis
GO:0045444  fat cell differentiation
GO:0035136  forelimb morphogenesis
GO:0003007  heart morphogenesis
GO:0034088  maintenance of mitotic sister chromatid cohesion
GO:0001656  metanephros development
GO:0000278  mitotic cell cycle
GO:0007064  mitotic sister chromatid cohesion
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0003151  outflow tract morphogenesis
GO:0031065  positive regulation of histone deacetylation
GO:0040018  positive regulation of multicellular organism growth
GO:0045778  positive regulation of ossification
GO:0048638  regulation of developmental growth
GO:0045995  regulation of embryonic development
GO:0042634  regulation of hair cycle
GO:0006974  response to DNA damage stimulus
GO:0007605  sensory perception of sound
GO:0019827  stem cell maintenance

Cellular Component

GO:0032116  cohesin loading complex
GO:0005654  nucleoplasm
GO:0005634  nucleus

Molecular Function

GO:0003682  chromatin binding
GO:0070087  chromo shadow domain binding
GO:0042826  histone deacetylase binding
GO:0005515  protein binding
GO:0008022  protein C-terminus binding
GO:0047485  protein N-terminus binding