pallidin homolog (mouse)

 jump to detail

Synonym

pallidin homolog (mouse), PALLID, Pallid protein homolog, Syntaxin 13-interacting protein, PLDN, Pallidin

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip nodata
CAGE cerebrum:4.13 cerebellum:- brain stem:3.87 corpus callosum/glia:3.61 pineal gland:4.55 peripheral nerve:- spine:4.15 retina:- eye:- artery/aorta:3.72 vein:3.62 lymphnode:3.74 peripheral blood:- spleen:4.13 thymus:3.68 bone marrow:- adipose:3.88 bone:- skin:-
RNA-seq cerebrum:4.53 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.85 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.02 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip nodata
CAGE uterus:3.98 placenta:3.63 prostate:3.90 ovary:3.88 testis:3.67 heart:3.82 muscle:3.95 esophagus:3.64 stomach:- intestine:3.57 colon:3.59     liver/hepato:4.09    lung:3.72 bladder:3.94 kidney:3.72 pituitary:4.42 thyroid/parathyroid:3.80 adrenal gland:- pancreas:3.42 breast:3.73 salivary:3.78
RNA-seq uterus:- placenta:- prostate:4.26 ovary:4.52 testis:3.93 heart:3.39 muscle:2.68 esophagus:- stomach:- intestine:- colon:4.13     liver/hepato:3.40        lung:3.90    bladder:- kidney:3.88 pituitary:- thyroid/parathyroid:4.74 adrenal gland:4.33 pancreas:- breast:3.99 salivary:-

Gene Information

IDs

Refseq ID NM_012388
Gene ID 26258
Unigene ID -
Probe set ID -
Ensembl ID ENSG00000104164
GTEx ID ENSG00000104164

Orthologous Gene

Mouse[2]  NM_019788
Rat[1]  NM_001025714

Chromosomal Region

15q21.1  [45,879,417  -  45,901,909]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

2968981
8608138
8619474
8986625
9110174
10610180
11031247
11252894
11936273
12019270
12191018
12477932
12576321
12923531
14702039
15102850
15489334
16169070
16189514
17182842
19322201
19546860
20301464
20936779
21832049
21988832

Gene Ontology  (GO ID)

Biological Process

GO:0008089  anterograde axon cargo transport
GO:0048490  anterograde synaptic vesicle transport
GO:0007596  blood coagulation
GO:0030318  melanocyte differentiation
GO:0032438  melanosome organization
GO:0032402  melanosome transport
GO:0006944  membrane fusion
GO:0016044  membrane organization
GO:0031175  neuron projection development
GO:0032816  positive regulation of natural killer cell activation
GO:0050942  positive regulation of pigment cell differentiation
GO:0006892  post-Golgi vesicle-mediated transport
GO:0033299  secretion of lysosomal enzymes
GO:0016081  synaptic vesicle docking during exocytosis

Cellular Component

GO:0031083  BLOC-1 complex
GO:0005737  cytoplasm
GO:0005829  cytosol
GO:0012505  endomembrane system
GO:0005768  endosome
GO:0019898  extrinsic to membrane
GO:0031201  SNARE complex
GO:0030133  transport vesicle

Molecular Function

GO:0051015  actin filament binding
GO:0042802  identical protein binding
GO:0005515  protein binding
GO:0042803  protein homodimerization activity
GO:0019905  syntaxin binding