vacuolar protein sorting 33 homolog B (yeast)

 jump to detail

Synonym

hVPS33B, VPS33B, vacuolar protein sorting 33B (yeast homolog), Vacuolar protein sorting-associated protein 33B, vacuolar protein sorting 33B (yeast), FLJ14848

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:6.18 cerebellum:6.24 brain stem:6.16 corpus callosum/glia:5.92 pineal gland:- peripheral nerve:6.08 spine:5.94 retina:- eye:- artery/aorta:6.04 vein:5.65 lymphnode:6.45 peripheral blood:- spleen:6.37 thymus:6.35 bone marrow:6.24 adipose:5.99 bone:- skin:6.33
CAGE cerebrum:2.19 cerebellum:- brain stem:2.05 corpus callosum/glia:2.11 pineal gland:1.50 peripheral nerve:- spine:1.87 retina:- eye:- artery/aorta:1.61 vein:1.89 lymphnode:1.93 peripheral blood:- spleen:1.96 thymus:2.05 bone marrow:- adipose:1.79 bone:- skin:-
RNA-seq cerebrum:2.85 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.05 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.81 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:6.07 placenta:6.29 prostate:6.19 ovary:6.23 testis:6.31 heart:5.52 muscle:5.84 esophagus:6.27 stomach:6.02 intestine:6.09 colon:6.30 liver/hepato:5.59 lung:5.93 bladder:- kidney:5.86 pituitary:6.26 thyroid/parathyroid:6.22 adrenal gland:5.93 pancreas:6.28 breast:6.37 salivary:6.16
CAGE uterus:1.89 placenta:1.77 prostate:1.59 ovary:1.87 testis:2.01 heart:1.15 muscle:0.68 esophagus:1.96 stomach:- intestine:2.12 colon:2.00     liver/hepato:1.51    lung:1.69 bladder:1.56 kidney:1.48 pituitary:1.85 thyroid/parathyroid:1.61 adrenal gland:- pancreas:1.87 breast:1.36 salivary:1.67
RNA-seq uterus:- placenta:- prostate:2.40 ovary:2.44 testis:2.44 heart:1.07 muscle:1.19 esophagus:- stomach:- intestine:- colon:1.53     liver/hepato:1.64        lung:1.80    bladder:- kidney:2.37 pituitary:- thyroid/parathyroid:2.63 adrenal gland:3.03 pancreas:- breast:1.98 salivary:-

Gene Information

IDs

Refseq ID NM_018668
Gene ID 26276
Unigene ID -
Probe set ID 218415_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000184056
GTEx ID ENSG00000184056

Orthologous Gene

Mouse[1]  NM_178070
Rat [0]  

Chromosomal Region

15q26.1  [91,541,646  -  91,565,833]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8996080
10894945
11250079
12477932
14702039
15052268
15489334
15790593
16123220
16189514
16344560
18347289
18367154
18474358
18552835
19109425
19274792
21139048
21832049
21890473
21900206
21906983
22677173
22753090
22939629
23002115
23918659
24163370
24255178
24415890
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0032418  lysosome localization
GO:0032400  melanosome localization
GO:0006944  membrane fusion
GO:0070889  platelet alpha granule organization
GO:0015031  protein transport
GO:0006904  vesicle docking during exocytosis
GO:0016192  vesicle-mediated transport

Cellular Component

GO:0005737  cytoplasm
GO:0030897  HOPS complex
GO:0005770  late endosome
GO:0031902  late endosome membrane
GO:0005765  lysosomal membrane
GO:0005764  lysosome
GO:0048471  perinuclear region of cytoplasm
GO:0031091  platelet alpha granule

Molecular Function

GO:0005515  protein binding