neuronal PAS domain protein 4

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Synonym

HLH-PAS transcription factor NXF, Neuronal PAS4, Le-PAS, NPAS4, NXF, PASD10, Neuronal PAS domain-containing protein 4, neuronal PAS domain protein 4

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:3.60 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:5.90 artery/aorta:- vein:- lymphnode:10.10 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE cerebrum:0.91 cerebellum:- brain stem:0.24 corpus callosum/glia:0.63 pineal gland:0.51 peripheral nerve:- spine:0.22 retina:- eye:- artery/aorta:0.47 vein:0.34 lymphnode:0.03 peripheral blood:- spleen:0 thymus:0.06 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.03 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.08 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:9.30 salivary:-
GeneChip nodata
CAGE uterus:0.55 placenta:0 prostate:0.44 ovary:0.47 testis:0.46 heart:0.15 muscle:0 esophagus:0 stomach:- intestine:0.14 colon:0     liver/hepato:0    lung:0 bladder:0.46 kidney:0 pituitary:2.65 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.60 ovary:0.22 testis:0.06 heart:0.00 muscle:0 esophagus:- stomach:- intestine:- colon:0.25     liver/hepato:0        lung:0.10    bladder:- kidney:0.04 pituitary:- thyroid/parathyroid:0.04 adrenal gland:0.05 pancreas:- breast:0.03 salivary:-

Gene Information

IDs

Refseq ID NM_178864
Gene ID 266743
Unigene ID Hs.256036
Probe set ID -
Ensembl ID ENSG00000174576
GTEx ID ENSG00000174576

Orthologous Gene

Mouse[1]  NM_153553
Rat[1]  NM_153626

Chromosomal Region

11q13.2  [66,188,475  -  66,194,178]

Gene Family (Interpro ID)

IPR000014  PAS

Link to Pubmed  (Pubmed ID)

12477932
14701734
14702039
15489334
21926972

Gene Ontology  (GO ID)

Biological Process

GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005667  transcription factor complex

Molecular Function

GO:0003677  DNA binding
GO:0046982  protein heterodimerization activity
GO:0004871  signal transducer activity