nuclear fragile X mental retardation protein interacting protein 1

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Synonym

NUFIP1, NUFIP, Nuclear FMRP-interacting protein 1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:16.60 cerebellum:25.20 brain stem:- corpus callosum/glia:- pineal gland:148.30 peripheral nerve:- spine:112.30 retina:118.60 eye:29.40 artery/aorta:- vein:- lymphnode:30.30 peripheral blood:- spleen:- thymus:12.90 bone marrow:39.40 adipose:- bone:- skin:24
GeneChip cerebrum:5.51 cerebellum:5.23 brain stem:5.36 corpus callosum/glia:5.58 pineal gland:- peripheral nerve:5.58 spine:5.54 retina:- eye:- artery/aorta:5.56 vein:5.45 lymphnode:5.63 peripheral blood:- spleen:5.92 thymus:5.26 bone marrow:5.28 adipose:5.41 bone:- skin:5.36
CAGE cerebrum:2.60 cerebellum:- brain stem:2.31 corpus callosum/glia:2.56 pineal gland:2.74 peripheral nerve:- spine:2.40 retina:- eye:- artery/aorta:1.52 vein:2.39 lymphnode:2.23 peripheral blood:- spleen:2.30 thymus:2.49 bone marrow:- adipose:2.39 bone:- skin:-
RNA-seq cerebrum:2.08 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.76 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.98 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:27.30 placenta:10.90 prostate:22.50 ovary:74.50 testis:38.90 heart:25.50 muscle:20.10 esophagus:- stomach:- intestine:32.40 colon:8.50     liver/hepato:31.70        lung:24.40    bladder:- kidney:41.60 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:17.80 breast:27.90 salivary:328.40
GeneChip uterus:5.55 placenta:4.98 prostate:5.50 ovary:5.74 testis:6.14 heart:5.42 muscle:5.24 esophagus:5.68 stomach:5.81 intestine:5.31 colon:5.50 liver/hepato:5.60 lung:5.09 bladder:- kidney:5.80 pituitary:5.61 thyroid/parathyroid:5.85 adrenal gland:5.91 pancreas:5.14 breast:5.86 salivary:5.61
CAGE uterus:2.29 placenta:1.91 prostate:2.22 ovary:2.78 testis:2.85 heart:2.09 muscle:2.81 esophagus:1.95 stomach:- intestine:2.11 colon:2.19     liver/hepato:2.66    lung:2.42 bladder:2.29 kidney:2.22 pituitary:2.37 thyroid/parathyroid:2.12 adrenal gland:- pancreas:2.48 breast:2.34 salivary:1.95
RNA-seq uterus:- placenta:- prostate:1.73 ovary:2.46 testis:2.18 heart:1.04 muscle:1.89 esophagus:- stomach:- intestine:- colon:0.98     liver/hepato:1.21        lung:0.85    bladder:- kidney:1.57 pituitary:- thyroid/parathyroid:1.95 adrenal gland:1.59 pancreas:- breast:1.26 salivary:-

Gene Information

IDs

Refseq ID NM_012345
Gene ID 26747
Unigene ID Hs.525006
Probe set ID 205134_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000083635
GTEx ID ENSG00000083635

Orthologous Gene

Mouse[1]  NM_013745
Rat[1]  NM_001007758

Chromosomal Region

13q14.12  [45,513,384  -  45,563,618]

Gene Family (Interpro ID)

IPR015880  Zinc finger, C2H2-like
IPR007087  Zinc finger, C2H2-type

Link to Pubmed  (Pubmed ID)

10556305
10894927
12477932
12837692
12941608
15057823
15107825
15489334
16344560
17081983
17636026
18029348
20201926
20360068
23362303
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0000492  box C/D snoRNP assembly
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0006396  RNA processing

Cellular Component

GO:0022626  cytosolic ribosome
GO:0016363  nuclear matrix
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0005726  perichromatin fibrils
GO:0070761  pre-snoRNP complex
GO:0048786  presynaptic active zone
GO:0008023  transcription elongation factor complex

Molecular Function

GO:0003677  DNA binding
GO:0042802  identical protein binding
GO:0046872  metal ion binding
GO:0005515  protein binding
GO:0030674  protein binding, bridging
GO:0003723  RNA binding
GO:0030515  snoRNA binding